Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02853 CTCTAAAGCTTCACTCTTGACGAGTTTTTTCTCTTTTGTTACTACGCTTTCTCTCTCTACACAGACTCTCTCTTTCTCTCTCTTCCCAATCACCCTTTCCCCTTCAATCTATCGCTACCTTCTTCTTCTCAGATACACACGACAACACTACCAACCACCGAATAACACAAAACAGAGAAAGAAAGAAAGAAAACCCTAATTGCGCACACTCTCTCTTCAGGGAGAATTGAGGAAGAAAATTTCGATTTTTTTCCTCCTTTTTTTTTTTTTTTGAAAAATTTGATTTTGAGGAATTAAGGGTTGGGATTTATGTCCTTCAATCAATCAAAGTCCGATAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGGCAGCTTCAATCAGCAGCGAGGTTCCTCCGGCGGTGCGTACAGTAAGGGCGGCGGCGGCGGCGGCGGAGCCGGGCCTTCTCCGTCGCTCTCCTCTAACCGGAGTTGGGGTGGAGTGGATTTTGAAACTGGTTTTAACAAGAAGTCTAATAATAATGCACAAGGTGGGCAATCTAGGGTAAACCCTACACTGGTGAATTCGACTGAGACTAATAGTACTTATGCAGCCCGGACTGTACCAAATGGTTCCCATGTACAGCCACAGATTCATGGAGGGTCTGACGCACCACTTACAAATGCAACTGCCAAGCCATCTGAACCATCAGCTGCACAAAGGAGCACCAGAGCTGTTCCAAAAGCTCCTACATCTCAGCCTCCCGCCATGAATTCTGATCCAGCAGCTCCTACTACCCCCTCTAAGGTAGATGCATCAAAGGCATTCCCATTCCAATTTGGATCTATTAGTCCTGGCTTTATGAATGGGATGGCAATACCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGATGAGCAGAAACGTGATCAAGCTCGACATGGTTATAATAGACCTGTTCTGTCAGTGCCAGCACCTCCTGTTCCAAAGCAGCAGGCAGTGAAGAAGGATACTGGTATTGCTGACCAATCTAATGCTGGGGAGACTCATACTGGGACTAGGGCAAAAAAGGATACTCAAATGTCACCATTACCCCCAGCAAGCCAGATTCAGAAGCCTTCTGTCATTTCTTTATCTGGAATGTCAATGCCAATGGCATATCACCAGCCACAGGCATCTGTACACTTTGGTGGTCCTAATACACAGATTCCATCCCAAGGTATGTCATCGGCACCTCTTCAGATGCCATTAATGCCTTTACCGATTGGAAGTGGTGCACAAGTGCAACAACAGGTTTTTGTTCCAGGCCTTCAACCTCATCCAATGCATCCTCAGGGAATCATGCATCAAGGCCAAAGTATGGGTTTCACTCCCCAAATTGGTCCTCAGTTGCCCCATCAGTTAGGCAGCATGGGTATTGGTATTAGTCCACAATATCCACCGCAGCAAGGAGGAAAATTTGCTGCTCCTCGTAAAACTACTACTGTTAAGATAACTCATCCTGAGACTCATGAAGAGCTAAGACTTGATAAAAGGGCAGATGCATATACAGATAGTTGTTCATCTGGTGCAAGGCCTCATTCAGGCATGCCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCTTCTCATCCTATTAATTACTATCCACCAAGTTCCTATGGTACCACTCCTCTCTTCTATTCCAATCCTAGTTCTCTTCCATTAACTAGTAGCCAGATAACTTCTAACTCTCAACCACCAAGATTTAATTATGCTGTGAACCATGGTCCGCAAAATGTTAGTTTTGTAAATTCATCATCTCACAGCTCCCTGCCTGTTAATAAAGCTGGCACTCCTATTTCTGGCAATGTGGAACCACCTAATCCAGAAATTTCCCGGGAAATGCATAATGCAATCTTGCCAGCTCCATCGGGAGTAACTTCTGTGTCCATTAAGCCAAGTATTGGATCTGGTGTTGTGGACTCATCTTTTTCCAATTCCAGTACTCATAAGTCTGGATCTTCTATTACTTCGTTAACCACTGGTGATGCTTTCTCATCTGTACCGTTAAAAGGTTCTGAAACAGCTGAAACCTCTTCACAACAGTCTAAGGTGTCCAATGATTCATCAGTTTTGAGCTCTTTGCCAAATCTATCTGCTATGAAGCCTACATCAGCTTCCTTGTTGCTTTCTACATCTTATACGAGTGAAGATTCTGTTTCAGTTCTTCCTAATAAAGAAGGAAGCAAGCAGGAATCTCTTAGTAGGTCAAATTCATTAAAGGATAATCAGAAGAAAATACAGAAGAAAGGCCAATCACAGCATCAGGTAGCTGTACAATCACCTGCTGTGGCTAATGTGCCTTCCCAAGCTGTTGATGTTAAGAGTGATGTTTCTGAAACTGTGGAAACTAAAACAAACCATTCTGAGGCAATTACCAATGAAGATCTCTCAGTTGATGCTGTTAACATGAAAACCATTGATTCTACACTAGTTTCAGCTGAAGGACCTGTTACCCAAGTGGTGGATAATTTGAACAGTCACAAGAATGCACAACTTGATGAATTGTCAAAACAGGATAAACCGATACAGCCAAATATTTTGGAGATGGGTGGTAACACAGATAATTTGTCTCTTCAAGGATGTAAACAAAATGTTAGTGATGTTGGAACAGAATTAAAACAACCTAAGCAAGGTGCTGTGAAGTTAAGCACTGAGGTTATAGCCTTGAGGAGTGGGCAGCAAGGGCAGGATGAATCTCCCAGTTGTAGTTCTGACTGTGACAAGACAGCTGATAATATAGGCATGTCTACCTCTAGCATATTGGATTCTAGAGATGTTTCTTTAAATAGAAATGATAGTGTAGTTAGTAATGAAGCTGTTTCTACAAATTCTGGCTCATCAGATCAGCAGTCTGCTGATCTCCTAGAAACAACTTCAGAGCTATGCAAGGATAGTTCAGAGAATGCTGGCAATGGTTCATTGTCTCTTCCAGCATCAGGCACCAAGGACAGACCAATTTCTGAGCCTAGTAAGGTAAAACCTACATCAAAGGGAAAAAAAAAACTAAAAGAGATTCTTATGAAGGCTGATGCTGCTGGGTCAACATCTGATCTCTATAATGCGTATAAGGGACCGGGGGAAAAGAAAGAAACTGTTGAAAATTCAGAGAAAACCGAAAGTGATTCTACGTCTGGAAATTTAGAGCAGCTGCCTAATGATACTGCTCAGCCAGATGTTGTAGCAAATGAGCAACTTAAGCAGAGTAAAGCTGAACTTGATGATTGGGAGGATGCTGCTGACATGTCCACACCTAAGTTAGAAGTATCAGATGAAACTGAACAGGCTAGTGATGGAAGTGCAATTACTGCCAAAAAGTACTCTCGAGATTTCCTTCTGAAATTTGCTGACCAATGCACTGATCTTCCTGAAGGGTTTGAAATCACGGCAGACATAGCTGAGATTTTGATGAGTACTAATGTTAGTTCTCATGTAATTGAACGTGATTCACATTCTTCTAGTGGAAGAATTATTGATAGGTCAGGGGGGATATCTCGTCGTGGGAGTGGAGTTATTGAGGAAGACAAATGGAGTAAAGTTTCTAATGCATTTCATTCTAATATGCGTTTGGATGGGGTTGGAGGTAATGCAGGATTTCGACCTGGGCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGGCACCTCTGCAGCATGCCGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAACGAAATAGCCCTGATGGAGAAAGGTGGCAGCGTGCTAATAGCTTCCAGCTGAGAGGTTTAATTCCATCTCCTCCTCAAACTCCTTTACAAATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTATCAAGTGAGGAAGAGGCAAAGCAAAGGCAACTGAAGGGTATATTAAACAAGTTAACTCCCCAGAATTTTGAGAAACTTTTTGAACAGGTTAAAGCAGTTAATATTGACAATGTAGTCACTCTCAATGGTGTCATTTCACAAATCTTTGAGAAGGCCTTGGTGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTACATCTGGCAGTTGCGTTGCCTGATCTTAGTCAAGACAATGAAAAGATAACTTTCAAGAGATTATTGTTAAACAAGTGTCAGGAAGAATTTGAGAGGGGCGAAAGAGAGCAAGAAGAAGCTAACAAGGCTGATGAGGGTGAGATCAAGCTGTCTAATGAGGAAAGAGAAGAGAAACGAACCAAGGCAAGAAGACGTATGTTGGGTAATATCAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAAAGAATAATGCATGAATGCATCAAGAAGTTGTTGGGTCAGTATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAGCTGATGAGTACTATTGGGGAGATGATTGACCATCCCAAAGCAAAGGAACATATGGATGTATATTTTGATATGATGAGATCATTATCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGTTGAAGGATGTCATTGATTTGAGAAAGAATAGATGGCAACAAAGAAGAAAGGTGGAAGGTCCAAAGAAGATTGAGGAGGTGCACAGAGATGCTTCTCAAGAGAGGATGGCCCAAGCTGGTAGGCTGGGTCGTGGTCCTGGCAACAATCCACCTAGAAGAATCCCTATGGATTTTGGTCCAAGAGGCTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGGCTGCGTGGATTGCCTACTCAAGTTCGTGGGTATGGTTCTCAGGATGCTCGTATGGATGATAGGCAAACTTATGAGGCTAGAGCATTGTCAGTTCCCTTGCCTCAAAGACCTTTAGGTGATGAGCCAATAATGTTGGGACCACAGGGTGGTCTTGCCAGAGGGATGTCGATTAGGGGTCCACCTGCTTCAAGTTCGATTGGTCTAAATGGTTACAATAATTTGTCAGAGCGCACTTCATACAGCTCTAGGGAGGACCCTACTTCAAGATATATTCCAGATAGATTTGCTGGTTTGACTACTTACGATCAATCTAGTGTTCAAGATCGTAATATGAATTATGGAAACAGGGACTTGAGAAATTCAAATAGGATTTTTGATAAGCCTGTTGCAACTTCACCACCTGCCAGAACACAAGGGTCATCAATCTCACAAAATATTTCTTCAGAGCGACTGCAGGACATGTCTATGGCAGCAATCAGAGAATACTATAGTGCTAGAGATGTGAATGAAGTTGTTCTATGCATTAAAGATCTGAACTCTCCAAACTTTCATCCTTCCATGGTTTCTCTCTGGGTCACAGACTCGTTTGAGAGAAAGGATACCGAGAGAGATCTTTTGGCCCAACTGCTTGTCAAGCTTGTGAAATCCCAGGATGGAACCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTCAGTACTTTGGAAGATGCGGTTAACGATGCCCCGAAAGCACCAGAGTTTCTTGGCCGTGTTTTTGCCAAAACTATAACAGAGCATGTAGTCTCTTTGAAAGATATCGGGCGGTTGATACATGACGGTGGAGAGGAACCGGGCAGCCTCCTAGAAGCTGGACTTGCTGGTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAAGGTGATGCTTTTGTAAGTGAGATCTGTGGCAGCTCCAACTTGCGGTTGGAGACCTTCAGGCCGCCGGAACCTCTTCAATCAAGGAAGTTAGAGAAATTCATTTAGGTGGATAGAGATGCTCATAGAGGAAAATATTTATTTATGTCTAGTGCTAATAGGATACTCATTTGCAGAAATGGTTTTCTTCATGGGGGTGGGAAGGGAGATTTTTATGTTCGGATTTCTGTCTAAATATTATTTCTGCCGTGCCATATCTTCACTGCAATTATAAAAGGTTCAGTTAAGCGTCTGAAAATTTTAGGCGAAGTTTTATCTTCTGTCATGAGGGGTTTACCTTCCCAGAGCCGTCTTATATCTTCAGTTAACCATGCTGGCATATTCATCTGCATCATGTCAATGTGTATAGGCCCCTCTATTCTAGTCAAAAAATGTGTTGTAAATGGTACATGTAATCAAGCATAACGCAACAAACTAAATTGTTTTAAAATATACTAGATGACCATAATTTTTTTCAAGTGTTACTAGTTTTTGTTTAAGGGAGTATGTATGAGAATGCTATGGTAAGTGTTAAAGTAATTGGAAG 6253 0.4243 MSFNQSKSDKSDAVYRKSGRSGSFNQQRGSSGGAYSKGGGGGGGAGPSPSLSSNRSWGGVDFETGFNKKSNNNAQGGQSRVNPTLVNSTETNSTYAARTVPNGSHVQPQIHGGSDAPLTNATAKPSEPSAAQRSTRAVPKAPTSQPPAMNSDPAAPTTPSKVDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHGYNRPVLSVPAPPVPKQQAVKKDTGIADQSNAGETHTGTRAKKDTQMSPLPPASQIQKPSVISLSGMSMPMAYHQPQASVHFGGPNTQIPSQGMSSAPLQMPLMPLPIGSGAQVQQQVFVPGLQPHPMHPQGIMHQGQSMGFTPQIGPQLPHQLGSMGIGISPQYPPQQGGKFAAPRKTTTVKITHPETHEELRLDKRADAYTDSCSSGARPHSGMPSQSQPAQQFAASHPINYYPPSSYGTTPLFYSNPSSLPLTSSQITSNSQPPRFNYAVNHGPQNVSFVNSSSHSSLPVNKAGTPISGNVEPPNPEISREMHNAILPAPSGVTSVSIKPSIGSGVVDSSFSNSSTHKSGSSITSLTTGDAFSSVPLKGSETAETSSQQSKVSNDSSVLSSLPNLSAMKPTSASLLLSTSYTSEDSVSVLPNKEGSKQESLSRSNSLKDNQKKIQKKGQSQHQVAVQSPAVANVPSQAVDVKSDVSETVETKTNHSEAITNEDLSVDAVNMKTIDSTLVSAEGPVTQVVDNLNSHKNAQLDELSKQDKPIQPNILEMGGNTDNLSLQGCKQNVSDVGTELKQPKQGAVKLSTEVIALRSGQQGQDESPSCSSDCDKTADNIGMSTSSILDSRDVSLNRNDSVVSNEAVSTNSGSSDQQSADLLETTSELCKDSSENAGNGSLSLPASGTKDRPISEPSKVKPTSKGKKKLKEILMKADAAGSTSDLYNAYKGPGEKKETVENSEKTESDSTSGNLEQLPNDTAQPDVVANEQLKQSKAELDDWEDAADMSTPKLEVSDETEQASDGSAITAKKYSRDFLLKFADQCTDLPEGFEITADIAEILMSTNVSSHVIERDSHSSSGRIIDRSGGISRRGSGVIEEDKWSKVSNAFHSNMRLDGVGGNAGFRPGQGGNFGVLRNPRTQAPLQHAGGILSGPMQSMVNQGGMQRNSPDGERWQRANSFQLRGLIPSPPQTPLQMMHKAEKKYEVGKVSSEEEAKQRQLKGILNKLTPQNFEKLFEQVKAVNIDNVVTLNGVISQIFEKALVEPTFCEMYANFCLHLAVALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEIKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFDMMRSLSNNMNLSSRVRFMLKDVIDLRKNRWQQRRKVEGPKKIEEVHRDASQERMAQAGRLGRGPGNNPPRRIPMDFGPRGSSMLSPNAQMGGLRGLPTQVRGYGSQDARMDDRQTYEARALSVPLPQRPLGDEPIMLGPQGGLARGMSIRGPPASSSIGLNGYNNLSERTSYSSREDPTSRYIPDRFAGLTTYDQSSVQDRNMNYGNRDLRNSNRIFDKPVATSPPARTQGSSISQNISSERLQDMSMAAIREYYSARDVNEVVLCIKDLNSPNFHPSMVSLWVTDSFERKDTERDLLAQLLVKLVKSQDGTLGQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKTITEHVVSLKDIGRLIHDGGEEPGSLLEAGLAGDVLGSTLEVIKMEKGDAFVSEICGSSNLRLETFRPPEPLQSRKLEKFI 1821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02853 1821 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 364 1821 IPR045208 GO:0003743
Pste5g02853 1821 SUPERFAMILY ARM repeat 1627 1816 IPR016024 -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 47 158 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 930 944 - -
Pste5g02853 1821 Coils Coil 1280 1300 - -
Pste5g02853 1821 Pfam MIF4G domain 1198 1419 IPR003890 GO:0003723|GO:0005515
Pste5g02853 1821 MobiDBLite consensus disorder prediction 413 433 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 623 693 - -
Pste5g02853 1821 Gene3D - 1198 1433 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 870 887 - -
Pste5g02853 1821 SUPERFAMILY ARM repeat 1191 1422 IPR016024 -
Pste5g02853 1821 FunFam Eukaryotic translation initiation factor 4G 1627 1820 - -
Pste5g02853 1821 Pfam MA3 domain 1640 1746 IPR003891 -
Pste5g02853 1821 SMART ma3_7 1634 1748 IPR003891 -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 1443 1462 - -
Pste5g02853 1821 SMART if4_15 1198 1420 IPR003890 GO:0003723|GO:0005515
Pste5g02853 1821 Gene3D - 1625 1821 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 18 33 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 546 598 - -
Pste5g02853 1821 ProSiteProfiles MI domain profile. 1633 1757 IPR003891 -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 229 262 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 923 962 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 409 433 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 798 817 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 656 683 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 623 647 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 181 262 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 1546 1569 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 1 164 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 1546 1574 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 945 962 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 870 908 - -
Pste5g02853 1821 FunFam Eukaryotic translation initiation factor 4G 1198 1433 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 1290 1317 - -
Pste5g02853 1821 MobiDBLite consensus disorder prediction 893 908 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02853 Pste-Chr5 21223057 21232646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02853 1 673 Eukaryotic Initiation Factors Gene Family AT3G60240 35.644 5.70e-80 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02853 5 21223057 21232646 Pste5g02853 5 21223057 21232646 ECH
Pste7g00261 7 2372680 2381830 Pste5g02853 5 21223057 21232646 PCT