Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02844 ATGTCAGGAAAAGTAATTATCTCGGCTGTGTCTCTGATCCTGGTGGTGGGAGTTGCCATCGGCGTTGTGGTGGCGGTGAACAAGAAGGGAGATGATCCCTCACTTGAAGCTCACCAAAAATCTGTTGGCGTTGTATGCCAAAACACCGATGAGCAAAAGCTCTGCCATGACACTCTCAGCTCCGTCAAGGGCATAGACACCGCTGATCCAAAGGCTTACATTGCAACGGCGGTGAAAGCCACGATGGACAGCGTGATCAAAGCCTTCAACATGAGTGACAGGCTGACAACCGAGCACGGAAGCAGCGATAACGGCACAAAGATGGCTCTGGACGATTGCAAGGACCTGTTGCAATCCGCAATTCAGAGCCTTCAGCTCAGCACTGACATGGTTCAAAACAACAACATCCAAGCCGTGCACAACCAGCAAGCTGATTTCAAGAACTGGCTCAGTGCCGTTATCTCTTACCAACAGGCATGCATGGAGGGTTTTGACGATGACAAAGATGGCGAGAAGAAGATCAAGGATCAGTTGCATACCGAGAGCTTGGACAGCGTTGAGAAACTCACCGGCATCACCCTGGACATTGTCAGTGGTTTGTCTCACATCCTGGAGCAGTTCGGTTTGAAGTTTAACCTTAAACCCGCATCTCGTCGCCTTCTCACCAAGGAAGGCTACCCCACATGGTTCTCTGCTGCTGATCGTAAGCTCTTGGGTCAGCTTCAAGGTAAAGGATGGAGAGCACATGTGACCCCCAATGTCGTGGTTGCTCAGGATGGCTCGGGCCAATTTAAAACCGTTGCCGATGCTATTGCTTCTTACCCTGCCAATAACCAGGGTAGATACATTATCTACGTTAAGGCTGGTATCTATGACGAATACATCACTGTTCCCCATAGCGCAAAGAATATCCTCCTCTACGGTGATGGCCCCGCAAAGACCATTATCACCGGTCGCAAGAACTTCGTGGATGGTGTCAAGACCATGCAAACTGCCACTTTCGCCAACACTGCTGATGGGTTCATTGCCAAGGCATTGACATTCCAGAACACAGCCGGTGCTGAGGGTCATCAAGCCGTTGCATTCAGGAACCAGGGAGACACTTCAGCTGTGGTTGGCTGCCACATTTTGGGTTACCAAGACACCCTCTACGTACAAACCAACAGGCAATTCTACCGCAACTGCGTCATCTCCGGCACAATTGATTTCATCTTCGGCACCTCAGCCACCGTGATCCAGCACTCCGTCATCATCGTGAGGAAGCCCCTGGACAACCAGCTCAACACTGTGACCGCCGATGGCACATCACAGAAGAACATGGCTACGGGAATTGTTATCCAAGATTGCAGCATCGTCCCAGAACAAGAACTATTCCCTCTTAGGTTCCAAATCAAGTCATTCTTGGGCAGGCCATGGAAGCAATACTCAAGGACCGTGGTCATGGAATCCACCATTGGTGACTTCCTTCACCCCGAAGGATGGTGCCCATGGGCCGGAGAACACTTTGAAGACACCTTGTACTATGCAGAGTACAACAACGATGGACCCGGTGCCAATGTCAGCGGAAGGATTAAGTGGAAGGGTTATCGTGGTCTCATTAGCCGCGAAGAAGCTAACCGGTTCACTGCTGCCGAATTCCTCAAGGCCGGACCCAATGCCGGAACTGACTGGTTGAAGGCTCTTCATGTTCCTCACGCCCTTAGCCTCACCAAAGCTTAA 1719 0.5102 MSGKVIISAVSLILVVGVAIGVVVAVNKKGDDPSLEAHQKSVGVVCQNTDEQKLCHDTLSSVKGIDTADPKAYIATAVKATMDSVIKAFNMSDRLTTEHGSSDNGTKMALDDCKDLLQSAIQSLQLSTDMVQNNNIQAVHNQQADFKNWLSAVISYQQACMEGFDDDKDGEKKIKDQLHTESLDSVEKLTGITLDIVSGLSHILEQFGLKFNLKPASRRLLTKEGYPTWFSAADRKLLGQLQGKGWRAHVTPNVVVAQDGSGQFKTVADAIASYPANNQGRYIIYVKAGIYDEYITVPHSAKNILLYGDGPAKTIITGRKNFVDGVKTMQTATFANTADGFIAKALTFQNTAGAEGHQAVAFRNQGDTSAVVGCHILGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSATVIQHSVIIVRKPLDNQLNTVTADGTSQKNMATGIVIQDCSIVPEQELFPLRFQIKSFLGRPWKQYSRTVVMESTIGDFLHPEGWCPWAGEHFEDTLYYAEYNNDGPGANVSGRIKWKGYRGLISREEANRFTAAEFLKAGPNAGTDWLKALHVPHALSLTKA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02844 572 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Pste5g02844 572 PANTHER PECTINESTERASE 18 559 - -
Pste5g02844 572 FunFam Pectinesterase 38 201 - -
Pste5g02844 572 CDD PMEI-like_3 45 201 - -
Pste5g02844 572 SMART PMEI_2 37 196 IPR006501 GO:0004857
Pste5g02844 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 201 IPR035513 -
Pste5g02844 572 ProSitePatterns Pectinesterase signature 1. 278 297 IPR018040 -
Pste5g02844 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 200 IPR035513 -
Pste5g02844 572 Pfam Plant invertase/pectin methylesterase inhibitor 45 196 IPR006501 GO:0004857
Pste5g02844 572 SUPERFAMILY Pectin lyase-like 250 549 IPR011050 -
Pste5g02844 572 NCBIfam pectinesterase inhibitor domain 12 199 IPR006501 GO:0004857
Pste5g02844 572 Gene3D - 247 569 IPR012334 -
Pste5g02844 572 FunFam Pectinesterase 247 569 - -
Pste5g02844 572 Pfam Pectinesterase 253 548 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02844 Pste-Chr5 21155020 21156814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02844 1 569 Carbohydrate Esterase AT2G47030 39.767 8.31e-137 408