Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02843 ATGGCTCTGGACGATTGCAAGGACCTGTTGCAATCCGCAATTCAGAGCCTTCAGCTCAGCACTGACATGTGCCGTTATCTCTTACCAACAGGCATGCATGGAGGGTTTGACGATGACAAAGATGGCGAGAAGAAGATCAAGGATCAGTTGCATACCGAGAGCTTGGACAGCGTTGAGAAACTCACCGGCATCACCCTGGACATTGTCAGTGGTTTGTCTCACATCCTGGAGCAGTTCGGTTTGAAGTTTAACCTTAAACCCGCATCTCGTCGCCTTCTCACCAAGGAAGGCTACCCCACATGGTTCTCTGCTGCTGATCGTAAGCTCTTGGGTCAGCTTCAAGGCCAATTTAAAACCGTTGCCGATGCTATTGCTTCTTACCCTGCCAATAACCAGGGTAGATACATTATCTACGTTAAGGCTGGTATCTATGACGAATACATCACTGTTCCCCATAGCGCAAAGAATATCCTCCTCTACGGTGATGGCCCCGCAAAGACCATTATCACCGGTCGCAAGAACTTCGTGGATGGTGTCAAGACCATGCAAACTGCCACTTTCGCCAACACTGCTGATGGGTTCATTGCCAAGGCATTGACATTCCAGAACACAGCCGGTGCTGAGGGTCATCAAGCCGTTGCATTCAGGAACCAGGGAGACACTTCAGCTGTGGTTGGCTGCCACATTTTGGGTTACCAAGACACCCTCTACGTACAAACCAACAGGCAATTCTACCGCAACTGCGTCATCTCCGGCACAATTGATTTCATCTTCGGCACCTCAGCCACCGTGATCCAGCACTCCGTCATCATCGTGAGGAAGCCCCTGGACAACCAGCTCAACACTGTGACCGCCGATGGCACATCACAGAAGAACATGGCTACAGGAATTGTTATCCAAGATTGCAGCATCGTCCCAGAACAAGAACTATTCCCTCTTAGGTTCCAAATCAAGTCATTCTTGGGCAGGCCATGGAAGCAATACTCAAGGACCGTGGTCATGGAATCCACCATTGGTGACTTCCTTCACCCCGAAGGATGGTGCCCATGGGCCGGAGAACACTTTGAAGACACCTTGTACTATGCAGAGTACAACAACGATGGACCAGTGCCAATGTCAGCGGAAGGATTAAGTGGAAGGGTTATCGTGGTCTCATTAGCCGCGAAGAAGCTAACCGGTTCACTGCTGCCGAATTCCTCAAGGCCGGACCCAATGCCGGAACTGACTGGTTGA 1233 0.5069 MALDDCKDLLQSAIQSLQLSTDMCRYLLPTGMHGGFDDDKDGEKKIKDQLHTESLDSVEKLTGITLDIVSGLSHILEQFGLKFNLKPASRRLLTKEGYPTWFSAADRKLLGQLQGQFKTVADAIASYPANNQGRYIIYVKAGIYDEYITVPHSAKNILLYGDGPAKTIITGRKNFVDGVKTMQTATFANTADGFIAKALTFQNTAGAEGHQAVAFRNQGDTSAVVGCHILGYQDTLYVQTNRQFYRNCVISGTIDFIFGTSATVIQHSVIIVRKPLDNQLNTVTADGTSQKNMATGIVIQDCSIVPEQELFPLRFQIKSFLGRPWKQYSRTVVMESTIGDFLHPEGWCPWAGEHFEDTLYYAEYNNDGPVPMSAEGLSGRVIVVSLAAKKLTGSLLPNSSRPDPMPELTG 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02843 410 Pfam Pectinesterase 114 371 IPR000070 GO:0030599|GO:0042545
Pste5g02843 410 PANTHER PECTINESTERASE 1 381 - -
Pste5g02843 410 FunFam Pectinesterase 4 105 385 - -
Pste5g02843 410 ProSitePatterns Pectinesterase signature 2. 250 259 IPR033131 -
Pste5g02843 410 SUPERFAMILY Pectin lyase-like 115 374 IPR011050 -
Pste5g02843 410 ProSitePatterns Pectinesterase signature 1. 131 150 IPR018040 -
Pste5g02843 410 Gene3D - 111 393 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02843 Pste-Chr5 21143497 21144924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02843 89 369 Carbohydrate Esterase AT2G47030 46.945 1.81e-95 296