Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02837 ATGGGTGGGGAAGAAAGGGCGTACTCGGTGGGCAAGATTTCGGTGTGGTGGGACATTGAGAAGTGTGGTGTTCCCAAGGGCCAGGACGGTCATTCCATTGCCAAGAACATAACCTCCGCCCTCGTCAGTATAAACTACGGGGGACCAGTCTCCATCTACGCCTACGGCGACACAAGCCGCATCCCCCCGCCCCTCCAACACGCTCTCTCCAGCACCGGCATTGCCCTAAACCACGTGCCAAGTGGTGCCAAAGAAGCAAGCGACAAGAAGATTCTGGTGGACATGCTGTTATGGGCCGTAGACAATCCCGCTCCCGCCAACTATCTGCTTATATCCTGTGACAGAGACTTCTCCAATGCGCTACACCAACTCGGCCTCCGAAAGTACAACATTCTCCTCGCCCATCCCCCCATGTTTCTCCCTCCCTCGCCTCCGCCGCCAAAGTCGTCTGGCTCTGGACCACCCTCTCCGCCGGTGGCCTCCCTTCCTTCATTGCCCACTCCGACTCCACCTCCACCATTAGAAACAACACCGATCACCCTCACACTCCGGAACCCCTCAGAAAGTTCTTTTTCGCCGCTCCTCATCAATTCTTTGCTTGTAAAAGTAACGACTCCGCTAATGCCAAATGAAATCCCTCTTCTTATGAATGCTGCTTCTACCCGTCAAGACTATACTGCCCAGCCTCAGTACAGCGCGCAGGATCTTGTTGATGTTATTCTCAGAACCCTAAACCTTCTCAAGGTTGAAATGATGATGTCCACCGAGGCCAATATAATCGATTCCATTCGTTATGGGAATCCTAGGTATCAGACAATTGATGTGAGGATGGCCTTGGATTTAGCCATACAGCAACGTAAGGTAGTGAAACGAGTCCTTGGCGCCTTGCATTTGCATCTTGCTTTAAACGACACGCTCTGGAAGTGTGTCAACCATACAACTGGTCATCCTACTGATTTCCCACAGGAAATATGGGATAGAGTTAGCCAATTCCTTACTTCATCATCAGGGAGGTCCTTGTTTTTGATATCGCGTTGCAGATATGAAGCAAGTTTGATTCTAAAGAAATCGTGCCTTGGAGAGGTCGTATTAGGGAATGTGCTTAAAATTCTAGAGATGATGATCGCTGTCAAGAAATGGATTATACATCATCATAGTGGGTGGCAGCCGATTACCATTACGCTTAAGGAGAGTAAAGGTCATGCACGCAGTTATTCTGATTTTGGCTGA 1230 0.4976 MGGEERAYSVGKISVWWDIEKCGVPKGQDGHSIAKNITSALVSINYGGPVSIYAYGDTSRIPPPLQHALSSTGIALNHVPSGAKEASDKKILVDMLLWAVDNPAPANYLLISCDRDFSNALHQLGLRKYNILLAHPPMFLPPSPPPPKSSGSGPPSPPVASLPSLPTPTPPPPLETTPITLTLRNPSESSFSPLLINSLLVKVTTPLMPNEIPLLMNAASTRQDYTAQPQYSAQDLVDVILRTLNLLKVEMMMSTEANIIDSIRYGNPRYQTIDVRMALDLAIQQRKVVKRVLGALHLHLALNDTLWKCVNHTTGHPTDFPQEIWDRVSQFLTSSSGRSLFLISRCRYEASLILKKSCLGEVVLGNVLKILEMMIAVKKWIIHHHSGWQPITITLKESKGHARSYSDFG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02837 409 MobiDBLite consensus disorder prediction 141 177 - -
Pste5g02837 409 CDD PIN_limkain_b1_N_like 12 136 - -
Pste5g02837 409 PANTHER LIMKAIN B LKAP 10 266 IPR024768 GO:0005777|GO:0010468
Pste5g02837 409 Pfam OST-HTH Associated domain 343 401 IPR025677 -
Pste5g02837 409 MobiDBLite consensus disorder prediction 141 180 - -
Pste5g02837 409 Pfam NYN domain 12 137 IPR021139 GO:0004540
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02837 Pste-Chr5 21105732 21107294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02837 1 137 C2H2 Transcription Factor Family AT5G61190 69.343 4.59e-58 202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02837 5 21105732 21107294 Pste5g02837 5 21105732 21107294 ECH