Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02827 ATGGACGATTGCTGTGCCGTCTGCGCTGAGCCTTTGGAATGGGTTGCCTACGGACCCTGTTTGCACCGGGAGGTGTGTTCCACGTGCGTCGCTCGCCTCCGTTTCATCTGCGACGATCGCTGTTGCTGCATCTGCAAGACCGAATGCAACCTCGTATTCGTAACCAAGGCACTAGGAGATTATACAAGGATGATTAACGACTTTTCCATCCTTCCTTCTGAGGTAAGGGAGGGGAAAGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTTTCATGTAGTGTATGTGACAAGATGGAGGAGCGACCACAGGATGCTGCTTCAAGACGGCGAGCAAAGTTTAGAAATATAGGGCAGTTGAAGGGTCATTTATTCCACCGTCATAAGTTGCATATGTGCAGATTGTGTTTGGAGGGAAGGAAGGTTTTTATATGTGAGCAAAAACTATATTCCAGAGCACAGTTGAATCAACACACAAGTACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTCATGGGACATCCCATGTGTGAATTCTGCAGAACACCATTTTATGGAGACAATGAATTATGCATGCATATGGCTACAGAACATTATACTTGTCATATTTGCCAAAGATCTTTATTGTCATTTAAACTGGAAGAATTTGTATTTACATGTCTTGTGCAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAGGCTTGCCTTGCCAAGAAATTCGTAGTTTTTCCATCTGAAGCAGAGATGAAGAGGCATAATACTATTGAACATGGAGGGCGGATGTCACGGTGCAAGCGTAATGCTGCTCTTCAGGCATTAACCATAGCTTCCATTCCTCCCTTACAGATACCAACTAGCTTCCGATACAGACATGGTAATGAACAAGAGCAACGGCGTGGAAGAGGTCGTACGTTTCGTAGTGAATTTTCTGAAAATCAACTTTCTATGGCCATTGAAGCTAGTTTGGAAACAGCTAATGTAGCACAAACATTACATGACCAACCGACATCAAGTAGCGGGCAAGTTGTTGATGGGAATGATGATATTGATTCTCTCATTCAGCCATTTGAATCATTAGGTTCTGAATCATCAAGATACCTTCAAGCGTTGGGGCATAGCTCTAGGAATGGACCTCTGGAAGATTCTTCCTTTCCACCACTACCCATAAATTCCAGCAATGGCCAGCAAAGGCCCAAACATGAATCAGAAGGTTCATCTAGTAACACTATGGCTGCACGTCTACGTCGGCATGGCAACAGAACTGTAACTGTTATTAATTCTGGTAATGCTTGGCCAGCAGCAGGTCGTGGACGGGTTCAATCATCTAGTAATCATTCACAATCTAAATTGTCTACAAATAATTCTCTTGGACTATCTCGTAACACTGAACAGATGAAGACAGTAGTTAACAGTGGACAACCATCAACTTATGCTGGTTCTATTCAGGGTACACAGAGAACTTCTCATGGAAAATTACCTGCTAGTTCATCAAGGGACACACCTGACAATGTCAGAATCGTTCACTCCGATGAAGTTTCAATTTCTGATTTTCCTCCAGTTTCTGCTGCACAAATGAGTAAGTTACCTGTTGGCAACAAATCTTCATTGAATGTAGAAAATGTTCAGTCAGCGAACAAGTCTTTGGTTGAAAAGATTCGTTGTGCTCTTGATTTTGATGAAGAAAGATACACTATATTTAAAGACATATCTGCCCAGTATCGCCAAGGCACGATAGAAAGTAGTATATATCTGGACTATGTGCAGCAGTTTGGTTTGTCTCATCTTGTGCTTGAGTTGGCAAGACTATGCCCGGATACTCAGAAGCAGAAGGAGCTTGTTGAAGCTTACAGTGCTAGTTTGCAAAGAGATGCTTTATCAGAAAATAACTTGGTTCAAGGCAGCTCCCGTGACAAGGGCGGTCAAGTAAACAAGAAAGGTAAAGGTAAGTCTGTAGATAGTAGGGGGAGTAACTCCACAGAGAAGTTGGCTGATAGCTTTTTAAGCACTGTACATCAGCTACAGGCAAATTATAAATCTTCAGAAGAGAAGGTAGAGGTGCTATCAAGGGGTGATTACCGCACTGACAGGGGAAAATTAAAAATTGAGCCGCGGATTGATGCAAATTCGAGTAGTCAACTTACGATGAAGCTTAGTGGGCACACTGAAACATCAAATGGAAGTATATCTAATAAAAATAGAGATGATGGGGGTGTTGGGAACAAGCAGCGCAAGAAAACTTCCAAGTTCCTGAGAGTGCGTCTAGGTGATGGTTCTGCTTCGGCCCTTCTTGATCAACCAGATCCTGGAACAACAGAAAACTCTGAAGGAAACAGGGATGATTCTGGAGGAGGGCTACCTCATCAAATGCAGTTGAACTGGCTGGCGGAGTTTATGATTGAACTGCGATATAAACAGGAATATGGTGTTAGCTTAAGGAGTCATATTTGA 2523 0.4289 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRCCCICKTECNLVFVTKALGDYTRMINDFSILPSEVREGKVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKMEERPQDAASRRRAKFRNIGQLKGHLFHRHKLHMCRLCLEGRKVFICEQKLYSRAQLNQHTSTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELCMHMATEHYTCHICQRSLLSFKLEEFVFTCLVQIHFRQEHFLCEDEACLAKKFVVFPSEAEMKRHNTIEHGGRMSRCKRNAALQALTIASIPPLQIPTSFRYRHGNEQEQRRGRGRTFRSEFSENQLSMAIEASLETANVAQTLHDQPTSSSGQVVDGNDDIDSLIQPFESLGSESSRYLQALGHSSRNGPLEDSSFPPLPINSSNGQQRPKHESEGSSSNTMAARLRRHGNRTVTVINSGNAWPAAGRGRVQSSSNHSQSKLSTNNSLGLSRNTEQMKTVVNSGQPSTYAGSIQGTQRTSHGKLPASSSRDTPDNVRIVHSDEVSISDFPPVSAAQMSKLPVGNKSSLNVENVQSANKSLVEKIRCALDFDEERYTIFKDISAQYRQGTIESSIYLDYVQQFGLSHLVLELARLCPDTQKQKELVEAYSASLQRDALSENNLVQGSSRDKGGQVNKKGKGKSVDSRGSNSTEKLADSFLSTVHQLQANYKSSEEKVEVLSRGDYRTDRGKLKIEPRIDANSSSQLTMKLSGHTETSNGSISNKNRDDGGVGNKQRKKTSKFLRVRLGDGSASALLDQPDPGTTENSEGNRDDSGGGLPHQMQLNWLAEFMIELRYKQEYGVSLRSHI 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02827 840 MobiDBLite consensus disorder prediction 723 812 - -
Pste5g02827 840 MobiDBLite consensus disorder prediction 450 527 - -
Pste5g02827 840 MobiDBLite consensus disorder prediction 397 434 - -
Pste5g02827 840 MobiDBLite consensus disorder prediction 652 683 - -
Pste5g02827 840 PANTHER ZINC FINGER PROTEIN 598 1 728 IPR044288 GO:0061630|GO:0072344
Pste5g02827 840 MobiDBLite consensus disorder prediction 789 803 - -
Pste5g02827 840 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Pste5g02827 840 SMART c2h2final6 108 145 IPR013087 -
Pste5g02827 840 SMART c2h2final6 221 252 IPR013087 -
Pste5g02827 840 SMART c2h2final6 197 220 IPR013087 -
Pste5g02827 840 SMART c2h2final6 253 282 IPR013087 -
Pste5g02827 840 MobiDBLite consensus disorder prediction 461 527 - -
Pste5g02827 840 MobiDBLite consensus disorder prediction 730 760 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02827 1 811 C2H2 Transcription Factor Family AT3G62240 49.589 0.0 730
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02827 5 20979451 20983335 Pste5g02827 5 20979451 20983335 ECH