Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02797 TTAGAATCCATAAGGTGTTTCCGTGAGGGAAGGCGAAAACCCATTCACACACGCCCACAAAATAAAATGCTACGTATGAAAGGGTCGACCATGCATTGAATGGCACCGGCTAAAACGTTGTCCGTACACATACTTACCTACAATTGCCGGTAACTATTGTGTCACTGTTTTTGGCTTTAACCATGTTGATTACTTGTTTCACTTCCCAGCCCCATTTCCTCTCCTCACACAGCTTTCACTTTCTTGCATACCCCAAAGCCGCGATATCTATCTTCTTTCCTTCACCTAACCAGATCAACCCTACTCTCTTAATTAGCTGTGAAATGAAGGATTTAAATTTGGTCATTTGAGAGTGAGAGAGAAAGAGAGACATATGGAGAATAATAAGGAGATGATGGGTGTTAAGAAGGAAGGCTATGCCATAGGATCTTCAGCCTTCCCTTGCAATAATTATCCATTCTTTGATTTCTCTGAAGATAAGGGCTCTTTAGGGTTTATGGAGTTGTTGGGTGTGCAAGACTATAGTCCTCTGCTTGATGTGTCACTGCCTCAAACCTCTCCACAACCATCTGAGACTAAGAAAGACTGTTCTGAGGTAACCAACCACCAACAACAACCTGCGACTCCCAACTCCTCATCCATTTCCTCCGCGTCCAGTGAGGCACTCAACGAAGAACATAATAAAACTGACCACCAACCATGTCAACACTCAAAGACAAAAGAACAGTTGAAGGCTAAGAAGACAAATCAGAAGAGACAGAGAGAGCCGAGATTCGCGTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCCAGGAGCTATTATCGTTGCACCAGTGTGTCGTGTAATGTGAAGAAACGCGTGGAGCGATCTTTTGCCGATCCAAGCATCGTGGTGACAACCTACGAAGGCCAACACACACATCCAAGCCCGGTTATGGGTCGTTCGGGAGTCCCCAACAACTTTGGTTCAGTAATGTATGGATCTGGAACCTATATGTCCCAATACTATCAGCACCATCATCAACAACTTCACGTCAATGCTTTGGCTTTCCTCTCTTCTTCTACTTCAAAGAATGCCACTACTTTTCCTCAAGAGACGACTGCCTTGTTAAGTGACTATGGCCTTCTTCAAGATGTTATTCCTTCCCATATGTTGAAAGAAGACTAGAAGATAACCCCATTACTGTTTCTATGTGATTTATTATTGTTAGTTTTTGTAGGGGAATATACATATACAAGGACTCCGTTACTTCACTGGCCTGGGATATTTAAGTTTTAGTTTTTTCTGCTCAACATACTTGTAAAACCAACTTTATCTTTTTGCACATATATATATATATATATATATAGATCTTTATT 1416 0.4202 MENNKEMMGVKKEGYAIGSSAFPCNNYPFFDFSEDKGSLGFMELLGVQDYSPLLDVSLPQTSPQPSETKKDCSEVTNHQQQPATPNSSSISSASSEALNEEHNKTDHQPCQHSKTKEQLKAKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFADPSIVVTTYEGQHTHPSPVMGRSGVPNNFGSVMYGSGTYMSQYYQHHHQQLHVNALAFLSSSTSKNATTFPQETTALLSDYGLLQDVIPSHMLKED 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02797 283 ProSiteProfiles WRKY domain profile. 140 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02797 283 Pfam WRKY DNA -binding domain 146 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02797 283 PIRSF WRKY_txn_fact_IIc 1 283 IPR017396 GO:0003700
Pste5g02797 283 MobiDBLite consensus disorder prediction 99 130 - -
Pste5g02797 283 MobiDBLite consensus disorder prediction 56 98 - -
Pste5g02797 283 MobiDBLite consensus disorder prediction 56 130 - -
Pste5g02797 283 FunFam WRKY transcription factor 57 131 205 - -
Pste5g02797 283 SUPERFAMILY WRKY DNA-binding domain 137 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g02797 283 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 76 234 IPR044810 GO:0003700
Pste5g02797 283 SMART WRKY_cls 145 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02797 283 Gene3D WRKY domain 129 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02797 Pste-Chr5 20521781 20523552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02797 30 283 WRKY Transcription Factor Family AT2G47260 48.428 2.17e-67 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g02797 WRKY 2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02797 5 20521781 20523552 Pste5g02797 5 20521781 20523552 ECH
Pste5g02797 5 20521781 20523552 Pste4g01519 4 11349271 11351382 PCT