Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02790 ATGGCGAGCTTGTCTTGGGGATCACTGTCTCAACCTGGAACTTGTCGCTTCACATATCTCTCGCCGTTGATTTCGTCCAAATCACCTAGATCTGAATTCTTCGGGCTAATCGACGGCGTTACTCACTCAATTGGTAATCATAACTTTCCTGCTCTTCTTCCTTCCTTTAATTTATGCCTTCTTTTATTTGAACCCTCGCATGTCCTGTCATTTCCTCTTGAAAAATGCTGCATTCAACATGAAATTGCCACAGGAAGAGTGTATAACTTGTTTGAGCTTCTGCTGTATGGATTTCATCTTGTAAAATTTGTGAGTATATTGAAAATGGTTCGAGGCTTGGTGCTAAAATGGATGCTTATATTATCTTACCTGGTATTTATGATTGTGGCCAGTGAAAATGATAAAACAATGGAGCTTTCTTCTGTATACGATTCTAGATCACCTTTGGGGGTTGTTGTTATTCATGATCTACCTCTACCAGCAAATCTCCATGTGTTGAAGCATGTGTTTTCTCATGGGACACCACTTGCAGCACTGCCACCCGTCAATCCTCCTTCATATGGTCCCTTCACAAGTAATGGTCAATCCCCTACAGGTTCACATTTAACCATACCATTCAAGAAGAAGAGTGAAATGAAGCCTCCAATTCCTAGCTTTAAAGATATTGCCCCTGTGCATTCTACTGCAGGCCCTTCCTCTTTGGCTCAGCCACCATTGTCTCCTTATGCTTCTAATTGTTGTAAACAAGACATGGTGCTGAAAAGAGGCAGTAAGAATTGCCAATGTGCATATCCCGTAAAGCTAGACCTTTTGCTTTCCAATGTTTCTCAAAATCCTAATTGGAATTATTTTCTTGATGAATTAGCTACTCAGCTTGGGTTGCATAATACCCAGATTGAACTGATAAACTTTTATGTACTCAGCTTGTCAACATTAAATATATCAATGAATGTTACTCCACATAAAGGCATCAGTTTCTCTGCCAGTGAAGTTTCTAAAATAAACTCTTCCCTTTCAATGCATAAGGTTCAACTAGACCCTGGATTAGTAGGTGGATACAAACTTCTCAGCATAACATGGTTTCAACCACCGCCACCTTCTCAAGGAAAAAGGTGTAGGGGAATATGTGCAAGAATTCAAGTTAGTGACACAAACGACGTTGGCATCGGAGGAACAATTATTGGACTATTTCTTGGCAGGATTGAGGCAGAATTTGAGGAGCAAGCTCCTACTTTAGCTGCATCGCCTGTGAAAACACCTTTGTATCATTCACCTACTACTACATCAACATCGAGTTCTTCAAAAGGAGGAAGGCATTCAAATTTGTTTCTTATTCTTGGAATTGCTATAGGCGTAATCTTCATTGCTATCGTATCTGTTCTTGTATTCTGTTTATGTACATTCGTGCCAAAAGTAAACACACCTCCAAATCCCATAGAAGCAGAGAGTGCACTTTCAACTGTGGGTTCTCTTCCTCACCCGACTAGTACACGATTTATTGCTTATGAAGAACTTAAAGAAGCCACAAACAATTTTGAACCTGCAAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTGAGTGATGGTACTCCTGTGGCAATTAAGAGGCTTACAAGTGGAGGACAGCAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATACTTTAGTAATCGTGACTCATCACAAAATCTACTTTGCTACGAGCTTGTCCCTAATGGAAGTTTAGAGGCTTGGCTTCATGGTCCATTAGGAATCAATTGTCCCTTGGATTGGGACACAAGGATGAAAATTGCACTTGACGCTGCAAGGGGACTTTCATACCTGCATGAAGACTCACAGCCCTGTGTAATACATAGAGACTTCAAGGCATCCAACATATTGCTTGAGAATAACTTTCATGCTAAGGTAGCAGATTTTGGTCTTGCTAAGCAAGCACCTGAAGGAAGATCTAATTATTTGTCTACTCGTGTCATGGGGACATTTGGGTATGTAGCTCCTGAATATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGTGTTGTCTTGCTAGAATTGCTTACTGGTAGGAAGCCTGTGGATATGTCACAGCCAACTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATCCTTAGAGATAAGGACCGTTTGGAAGAGATTGCTGATCCAAGGCTTGGGGGAAAGTATCCAAAGGAAGATTTTGTACGTGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCAGAAGCAAACCAACGGCCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAGTACCATGATTCTGTGTTAGTCTCATCCAATACACGGGTGAACCTAAGACAGTCCTCTAGCACTTTTGAATTTGATGGAACATCTTCAATGTTCTCTTCAGGTCCTTACTCTGGTCTAAGTGCCTTTGACAATGATAATATTTCTAGGACTGTGGTTTTCTCTGAAGATCTTTGTGAAGGACGATGAATGCTGAGAAACCATAAACCGTTCAACTTATTTTTCCTTTTAATTTTTGAGTTTCAATCAAAAGTTTTTAGAACCTCCTAATTTGCAGCACTTGCAACCTAAAGCTAAAGGTTTAACCATTTTGGTGGTGAGTGGAAGGGTAATGTGATTGTAACCGGTAATAGTTTGATTAGCAGATTAGTTATTTAAAGAATTAGGTAATAGCTTGTATAAATAGAACAAAATTTGC 2800 0.4061 MASLSWGSLSQPGTCRFTYLSPLISSKSPRSEFFGLIDGVTHSIGNHNFPALLPSFNLCLLLFEPSHVLSFPLEKCCIQHEIATGRVYNLFELLLYGFHLVKFVSILKMVRGLVLKWMLILSYLVFMIVASENDKTMELSSVYDSRSPLGVVVIHDLPLPANLHVLKHVFSHGTPLAALPPVNPPSYGPFTSNGQSPTGSHLTIPFKKKSEMKPPIPSFKDIAPVHSTAGPSSLAQPPLSPYASNCCKQDMVLKRGSKNCQCAYPVKLDLLLSNVSQNPNWNYFLDELATQLGLHNTQIELINFYVLSLSTLNISMNVTPHKGISFSASEVSKINSSLSMHKVQLDPGLVGGYKLLSITWFQPPPPSQGKRCRGICARIQVSDTNDVGIGGTIIGLFLGRIEAEFEEQAPTLAASPVKTPLYHSPTTTSTSSSSKGGRHSNLFLILGIAIGVIFIAIVSVLVFCLCTFVPKVNTPPNPIEAESALSTVGSLPHPTSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLSDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPRLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLVSSNTRVNLRQSSSTFEFDGTSSMFSSGPYSGLSAFDNDNISRTVVFSEDLCEGR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02790 856 MobiDBLite consensus disorder prediction 420 437 - -
Pste5g02790 856 ProSiteProfiles Protein kinase domain profile. 512 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02790 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 590 807 - -
Pste5g02790 856 Gene3D Transferase(Phosphotransferase) domain 1 590 809 - -
Pste5g02790 856 Pfam Protein kinase domain 515 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02790 856 MobiDBLite consensus disorder prediction 417 437 - -
Pste5g02790 856 CDD STKc_IRAK 518 788 - -
Pste5g02790 856 PANTHER OS01G0750732 PROTEIN 243 803 - -
Pste5g02790 856 SUPERFAMILY Protein kinase-like (PK-like) 486 789 IPR011009 -
Pste5g02790 856 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Pste5g02790 856 Gene3D Phosphorylase Kinase; domain 1 493 589 - -
Pste5g02790 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Pste5g02790 856 FunFam Receptor-like serine/threonine-protein kinase ALE2 492 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02790 Pste-Chr5 20326601 20338756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02790 113 856 Receptor kinase-like Gene Family AT4G02010 63.479 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pste5g02790 Pkinase 1.9e-44 CL0016