Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02788 GGGGTTGCTGGGGCTGGTGTTAGTGATATGTGCATACTTGCTCATAACTTTATATTAAATGAGTGAAAAGAAAGAAAGAAAGCAACTTGCAGGCTTTGCCATTATCTCTTCCCTTCCTACTATACTATATTTTCTCTCTCTAATCAATCATACTTCTCATCTTCATATCTAAAACCTCCATTTCTCAGATCAAGCTTGCGGATATTGGAAAAGACAAATACATACCTATGGACAGTAATACTAGTGCCTCTCCCCAACCTGACTCAGAAGCATCTTCAGTGCTTAAATCAGAAACTCAAACATCAAAGAAAAGGAAAATGGTAGAGAAAACAGTTGTGGCAGTGAAGATAGGAGAGAATATTGGGAAGCTGAAGAATGAAGGGCTACCTTCGGACTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGGTCTCCATATCCAAGGGGGTATTACAAGTGCAGCACATCCAAAGGTTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCGTCAATGGTCATAATCACATATACCTCTACACATAACCATCCATGCCCCACTACCATCACCACAACAAACTCACCCCAACAACCAAAAGAATCTGAATCCGAAACCACCCAAGACGTCTCAACTACCTCAAAGGAGGAAGACCAAGAACATATAGAAGAAGAGCAAAAGGATAATAAGCTCAGTGATGAAGGTACAAAAGAAGAAAATTTTCATTACTTGCAATCTCCAATAAGGTGCTCCCAAGATATCATTATAGAACAAGAAGATCCTTTCAAACTAAACACGGAGAAAAACTACGACAGAATAGATCTCCTCTTAGAGGAAGAGCCCATTTGTTATGCGCAACTCAAGCACTTATCTGCTTCCAAAAATGAAGAACTTGATTTTTTCGATGAGCTTGAAGAGTTGCCCATGTCTTCATCTTTCTTGCACTTTACAAGGAGCATTTTTTCCGATGAAAGGATTCCCGTTGCCCCTTCTTGATTCAAGTGTTGTTTCGGTGCTCTCTTATTAGTTGATAGTGTATCTATTGTTTTTATATATCCATCTCATCTGGTTTTTCATTTCAGAATTTTTGTTTTGTTTTTGTATCCTTAATAAATCCTAGTATTGTTCATCATTTTGGCATGAGCAGGTTTAGTGTGTAGACTAAATCATCACCTCTTGTAGTTAAAGGATGATGCTTGGCTCACAATCAATGGTATATAGTAATTTCCGTATTCAATATTTCTATATTATGCATTAAGTGCATG 1276 0.3801 MDSNTSASPQPDSEASSVLKSETQTSKKRKMVEKTVVAVKIGENIGKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMVIITYTSTHNHPCPTTITTTNSPQQPKESESETTQDVSTTSKEEDQEHIEEEQKDNKLSDEGTKEENFHYLQSPIRCSQDIIIEQEDPFKLNTEKNYDRIDLLLEEEPICYAQLKHLSASKNEELDFFDELEELPMSSSFLHFTRSIFSDERIPVAPS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02788 259 MobiDBLite consensus disorder prediction 138 163 - -
Pste5g02788 259 Pfam WRKY DNA -binding domain 56 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02788 259 MobiDBLite consensus disorder prediction 1 22 - -
Pste5g02788 259 ProSiteProfiles WRKY domain profile. 49 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02788 259 FunFam WRKY transcription factor 65 34 115 - -
Pste5g02788 259 SUPERFAMILY WRKY DNA-binding domain 52 115 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g02788 259 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 240 IPR044810 GO:0003700
Pste5g02788 259 MobiDBLite consensus disorder prediction 109 137 - -
Pste5g02788 259 Gene3D WRKY domain 42 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g02788 259 SMART WRKY_cls 54 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02788 259 MobiDBLite consensus disorder prediction 1 30 - -
Pste5g02788 259 MobiDBLite consensus disorder prediction 109 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02788 Pste-Chr5 20278442 20280325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02788 21 241 WRKY Transcription Factor Family AT4G01250 38.462 5.48e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g02788 WRKY 4.9e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02788 5 20278442 20280325 Pste5g02788 5 20278442 20280325 ECH