Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02787 ATGGAAATTGACCAATTTTCTTTCACGGCTTTAAATTTGAAAGGAATCCAGGAGGATGATGGCGATGTGTTCCAAGGTAAAGAGAGTTTCACTGGAGTGGAATTGCTGGGAGAGATGGATTCTCTCCGTACTGAGAATGGAAAAGGAGTCAAATTGTTCAAAGATCAAAATCAGAAACAGCTACAAGAACCCAGAGTTGATAGCTGGATGTTAGAAGAGATCAACTTTGACCCTGGTATTCAAATGCAACCAAAACAGCTATTTTGTGAAACTACAGGGCTAATGAAACATGGTGTGGCAAGTTCAGAATCAGTTGAATACAATAAGCAGGTGCATCCATCATTGGCATCCTTGGAGCTCCTCAGAAATTACGGAAGCAGATTCAAGAGGGTAAGAGAGCAAAATATAAGCACCTTAAGCAATATTGAAACTTCTTTTGACCACCAGAAGATGTCAACTGAAGAAATAATAAGGGTGGCTGGAGCAAGGTATATCCAATATTCTGCTCATTGGAATGATAGTTTTTGCATTCCTATCCACCCATACGGATTAGATCTTAGTGGTTTTTCTGAGGAAGAAAATAGAGACATAGAACTTGCTCAATTTCTCCTTGCTGCGGCTGAGAGGGTAGGTTGCCAACAATTTGAACGTGCAAACAGGTTGCTTCTCCATTGTCAATGGAACTCATCCGCCAGTGCAAGCCCTGTTCAAAGAGTTATCTTTCATTTCGCTCGAGCACTTCGAGAGAGAATAGACAAAGAAACTGGAAGGATGACAGTTAAGGGATCACAAAAAAATGAAGAAAGGGAGTTAATTCAGAAGATGAATCCCAACATTGCCCTTAGATGCCATAAAAAAGTTCCTTTCAATCAAGTAATGCAATTCACCGGGATACAAGCTATAGTGGAACATGTTGCATCGGAAACCAAAATCCATCTCATAGATCTTGAAATAAGAAGTGGGGTACAGTGTACAGCTTTGATGCAAGCACTGAAAGAGCGCCAGGATTGCATAGTGCAACTTCTGAAGATAACTGCCATTGGACTTAATTCATGCAAAACCATGATGGAAGAGAGCGGCAAAAGGTTAGCTAGTTTTGCCGAATCCTTGAACTTACCCTTTTCATACAAGGCAGTTTTTGTAAAAGACTTTGCAGAGATAAGGGAAGATCATTTTGAAATTGGAGAGGATGAAGCTGTGGCTGTATACTCTCCATATTTTCTAAGATGCATGGTATCAAGGCCTAATAGTATGGAAAATTTGATGCGGGTTATAAGGAATATCAAACCCGTTGTGATGATAGTCCTTGAAGTAGAAGCAAACCATAACTCACCCTCATTCGTGAATCGCTTCATTGAAGCATTGTTCTTCTATTCAGCATTTATTGATTGCCTTGAAACATGCATAAAACATGAGATTGAGTGCAGAATGACAGTAGAAGCAATATTATCTGAAGGGATACGAGACATTGTTGCCAAGGAAGGGAGGGAAAGGACAGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAACTGGGTTTAGTGAGTCATCTGTGTACCAAGCTCACTTGGTCACCAAAGAGTTTGCTTTTGGGGAATTCTGCACTATAGACAAGAATGGAAAGTGTCTTATAGTTGGATGGAAGGGGACCCCAATGCATTCAATCTCGGCTTGGAGGTTTCTTTGA 1713 0.4051 MEIDQFSFTALNLKGIQEDDGDVFQGKESFTGVELLGEMDSLRTENGKGVKLFKDQNQKQLQEPRVDSWMLEEINFDPGIQMQPKQLFCETTGLMKHGVASSESVEYNKQVHPSLASLELLRNYGSRFKRVREQNISTLSNIETSFDHQKMSTEEIIRVAGARYIQYSAHWNDSFCIPIHPYGLDLSGFSEEENRDIELAQFLLAAAERVGCQQFERANRLLLHCQWNSSASASPVQRVIFHFARALRERIDKETGRMTVKGSQKNEERELIQKMNPNIALRCHKKVPFNQVMQFTGIQAIVEHVASETKIHLIDLEIRSGVQCTALMQALKERQDCIVQLLKITAIGLNSCKTMMEESGKRLASFAESLNLPFSYKAVFVKDFAEIREDHFEIGEDEAVAVYSPYFLRCMVSRPNSMENLMRVIRNIKPVVMIVLEVEANHNSPSFVNRFIEALFFYSAFIDCLETCIKHEIECRMTVEAILSEGIRDIVAKEGRERTVRNVKIDVWRRFFARYRMVETGFSESSVYQAHLVTKEFAFGEFCTIDKNGKCLIVGWKGTPMHSISAWRFL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02787 570 ProSiteProfiles GRAS family profile. 190 568 IPR005202 -
Pste5g02787 570 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 143 561 IPR005202 -
Pste5g02787 570 Pfam GRAS domain family 200 568 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02787 Pste-Chr5 20238846 20240933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02787 197 569 GRAS Transcription Factor Family AT1G66350 28.610 1.49e-48 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste5g02787 GRAS 7.7e-79 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02787 5 20238846 20240933 Pste5g02787 5 20238846 20240933 ECH