Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02781 ATGGCATCGATTCAACAACGTTCTTCGGCGACGAGTTCAGGATCTGAAGGAGGAGATCTGCAAATGGACGAGAGGAAGCGGAAGAGGATGCTGTCGAACCGCGAATCGGCGAGGCGATCGCGGATGAGGAAGCAGAAACAGCTGGAGGATTTGACCGATGAAGTTAGCAGATTGCAAGGCGCGAACAAGAAGCTTGTGGAGAGCATAAAGGGGAAGGAAGAAGCGTGCGCGGAGACTGAAGCCGTGAACAGCATTCTGAGAGCTCAGACAATGGAATTGGCGGATCGGTTGCGCTTCTTGAACTCCATCCTTGAGATCGCTGAAGAGGTCGGAGGATTATCCGTTGAGATTCCAGATCCTCTCCTCAAGCCCTGGCAGATTCCTCACCCCACGCAACCCATTATGGCCACCGCCAACATAATCGTGTGGTCCGTAATGTATTGGGTTCCTGAGATGAACATGAGGTACAGGGTGTTCATGTTGATGATGACTGTTAGTGGCATTGTCCTTTTGCCCGACTTGTAA 525 0.5162 MASIQQRSSATSSGSEGGDLQMDERKRKRMLSNRESARRSRMRKQKQLEDLTDEVSRLQGANKKLVESIKGKEEACAETEAVNSILRAQTMELADRLRFLNSILEIAEEVGGLSVEIPDPLLKPWQIPHPTQPIMATANIIVWSVMYWVPEMNMRYRVFMLMMTVSGIVLLPDL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02781 174 CDD bZIP_plant_GBF1 26 77 IPR045314 GO:0003700|GO:0006355
Pste5g02781 174 MobiDBLite consensus disorder prediction 19 54 - -
Pste5g02781 174 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 28 43 IPR004827 GO:0003700|GO:0006355
Pste5g02781 174 MobiDBLite consensus disorder prediction 1 54 - -
Pste5g02781 174 SMART brlzneu 21 85 IPR004827 GO:0003700|GO:0006355
Pste5g02781 174 Gene3D - 23 80 - -
Pste5g02781 174 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 23 70 IPR004827 GO:0003700|GO:0006355
Pste5g02781 174 FunFam BZIP transcription factor 23 74 - -
Pste5g02781 174 Coils Coil 34 68 - -
Pste5g02781 174 Pfam bZIP transcription factor 25 78 IPR004827 GO:0003700|GO:0006355
Pste5g02781 174 SUPERFAMILY Leucine zipper domain 25 70 IPR046347 GO:0003700|GO:0006355
Pste5g02781 174 MobiDBLite consensus disorder prediction 1 18 - -
Pste5g02781 174 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02781 Pste-Chr5 20164205 20164850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02781 1 141 bZIP Transcription Factor Family AT3G62420 50.000 1.61e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g02781 bZIP_1 3.4e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02781 5 20164205 20164850 Pste5g02781 5 20164205 20164850 ECH