Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02779 ATGCGACGAACAATTATTTTGGCGCCCATTTCTCAGATCGATAACTCACCTCATTTTCCCGCTTCTCTCTGTTGCTTTCCCTCTCGCTCTGTAGCCGTCATCGCCACCATGAGCACCAAGGACCTCAACTTCGGTGCAGACACAGTTCTGGCGAAGGAGTTCCTTTCCAACTTTGCAGATGCCAATGGTGAAGCCAAATACATGAGCATCCTGGCGAATGTTGCAAACCACAAAACTCGAGCAGTCCTGATTGACCTAGACGACTTAATTAATTACAAAGATGTGGATGAGGAATTTTTGAGGCGTGTTACTGAAAATACTCGAAGGTATATTACGATCTTTTCCAATGCAATTGACGAACTCATGCCGGAGTCCACTGAGGACTTCACCGACGATGATCATGACATATTGATGACTCAGAGATCTGATGAAGGAGCAGAAGGCACTGACGGATTTGATCCACGCCAGAAGATGCCTCCTGAAATCAAGCGTTATTATGAGCTTTATATTAAAGCATCTTCTAAAGGGCGACCATTTACAATTAGGGAGGTGAAAGCTTCAAATATTGGTCAGCTTGTAAGAATCTCTGGTATTGTGACGCGTTGTTCAGATGTTAAACCATTGATGAAAGTGGCTGTATACACGTGCGAGGATTGTGGGTTTGAAATTTACCAGGAAGTAACAGCTCGAGTCTTCATGCCCCTGTTTGAATGTCCATCAAAGCGCTGTGATACAAATAGAAGAAAGGGAAACGTTATCCTTCAATTGAGGGCATCAAAATTTTTGAGATTTCAAGAGGCCAAGATTCAAGAATTAGCTGAACATGTTCCTAAAGGCCATATTCCACGAACAATGACTGTTCATTTAAGAGGAGAGCTCACAAGAAAGGTGGCTCCAGGTGATGTGGTTGAATTATCTGGGATTTTTCTTCCTATACCTTACACTGGTTTTCGAGCAATGCGTGCGGGCTTAGTTGCTGACACTTACTTAGAGGCCATGTCTGTCACTCATTTCAAGAAAAAATACGAAGAATATCAACTCAGAGGAGATGAAGAAGAGCAGATTGCACGATTAGCAGAGGATGGTGACATCTACAATAAATTGGCACGATCACTTGCTCCTGAGATTTTTGGACATGACGACGTTAAAAAAGCACTGCTTCTTCTCCTTGTTGGTGCTCCGCATCGGACATTGAGAGATGGAATGAAGATTAGAGGAGATTTGCATATATGTTTGATGGGTGATCCTGGAGTTGCCAAGAGTCAGCTTCTTAAACATATAATCAATGTAGCACCCAGAGGGGTGTACACCACTGGCAGAGGAAGTAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTGACAAATGAGTTTGTTCTTGAAGGTGGAGCATTGGTGCTAGCAGATATGGGCATATGTGCCATTGATGAATTTGACAAGATGGATGAATCAGATCGGACAGCTATACATGAAGTTATGGAACAACAGACTGTAAGCATTGCTAAGGCTGGGATCACTACATCCCTGAATGCAAGGACTGCTGTCCTTGCTGCTGCTAATCCCGCATGGGGTAGATATGATCTAAGAAGAACTCCAGCTGAAAATATTAATCTACCTCATGCCCTCCTATCAAGGTTTGATCTTCTGTGGTTAATCCTTGATCGAGCTGATATGGATAATGATCTTGAAATGGCTAGGCATGTTGTTTATGTTCACCAAAATAAGGAGTCTCCTGCTCTAGGATTCACTCCTCTTGAACCATCTGTTCTACGTGCATACATATCAGCTGCTAGGAGATCATCCCCTACTGTACCCAGGGAACTAGAAGAGTATATTGCTACTGCATACTCAAGCATTCGCCAAGAAGAAGCAAGATCCAATGCTCCGCATTCCTACACTACTGTCAGAACACTGCTCAGTATTCTCCGCATATCAGCTGCATTAGCAAGACTCCGTTTTTCTGAAACTGTTGCTCAGAGTGACGTGGACGAAGCACTGAGGTTAATGCAGATGTCAAAATTCTCTCTGTACTCCGATGATCGTCAAAAATCTGGCCTAGATGCCATATCTGATATTTATTCCATACTGCGAGATGAAGCGGCCAGAGGTAGTCGAATGGATGTCAGCTATGCCCATGCACTGAACTGGATATCTAGGAAGGGTTACAGTGAAGCCCAGCTAAAAGAGTGCTTGGAGGAGTATGCAGCACTAAATGTATGGCAGATACATCCTCACACCTTTGATATTAGATTTATTGATGCTTGAAGCATTTCTTTTCCCTCATTGACATCGTTTGCGGCAATCTAGTCACAAGAAACTTGGATAAGAGTGCTTGGTGGACTTGGGGAATCATTGTGCAATTTGGTTTCTTAATTTATGTAGGTTGTTTGTATTGTTACAGTTAGATTTGTATTTTTTTACTTGAGTACAGTAATTGCAAATTCATATTTTTCCTATGCTTTAGTATTAAATGAAGCACGCATTAAGTTGCTTCATAATCGTAAAATCTAGAATAGAAAAGTACAAGCTTCGAATGCATTGTGCTTAGCCTTTGACACA 2565 0.4234 MRRTIILAPISQIDNSPHFPASLCCFPSRSVAVIATMSTKDLNFGADTVLAKEFLSNFADANGEAKYMSILANVANHKTRAVLIDLDDLINYKDVDEEFLRRVTENTRRYITIFSNAIDELMPESTEDFTDDDHDILMTQRSDEGAEGTDGFDPRQKMPPEIKRYYELYIKASSKGRPFTIREVKASNIGQLVRISGIVTRCSDVKPLMKVAVYTCEDCGFEIYQEVTARVFMPLFECPSKRCDTNRRKGNVILQLRASKFLRFQEAKIQELAEHVPKGHIPRTMTVHLRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKKYEEYQLRGDEEEQIARLAEDGDIYNKLARSLAPEIFGHDDVKKALLLLLVGAPHRTLRDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEFVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPHALLSRFDLLWLILDRADMDNDLEMARHVVYVHQNKESPALGFTPLEPSVLRAYISAARRSSPTVPRELEEYIATAYSSIRQEEARSNAPHSYTTVRTLLSILRISAALARLRFSETVAQSDVDEALRLMQMSKFSLYSDDRQKSGLDAISDIYSILRDEAARGSRMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02779 756 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 52 685 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 SMART mcm 177 676 IPR031327 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 Gene3D - 49 139 - -
Pste5g02779 756 CDD MCM7 367 674 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 Gene3D - 181 309 IPR012340 -
Pste5g02779 756 Pfam MCM AAA-lid domain 591 674 IPR041562 -
Pste5g02779 756 FunFam DNA replication licensing factor MCM7 208 262 - -
Pste5g02779 756 Pfam MCM N-terminal domain 52 169 IPR027925 -
Pste5g02779 756 Pfam MCM OB domain 181 311 IPR033762 -
Pste5g02779 756 FunFam DNA replication licensing factor MCM7 349 681 - -
Pste5g02779 756 SUPERFAMILY Nucleic acid-binding proteins 51 332 IPR012340 -
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein family signature 493 506 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein family signature 405 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein family signature 517 529 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein family signature 465 479 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein family signature 544 552 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 196 207 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 170 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 231 243 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 214 225 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 323 333 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Pste5g02779 756 Gene3D - 349 681 IPR027417 -
Pste5g02779 756 ProSitePatterns MCM family signature. 473 481 IPR018525 GO:0003677|GO:0005524|GO:0006260
Pste5g02779 756 Gene3D - 208 262 - -
Pste5g02779 756 ProSiteProfiles MCM family domain profile. 364 570 IPR001208 GO:0003677|GO:0005524|GO:0032508
Pste5g02779 756 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 374 685 IPR027417 -
Pste5g02779 756 Pfam MCM P-loop domain 352 574 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02779 Pste-Chr5 20102146 20107970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02779 40 754 Core DNA Replication Machinery Family AT4G02060 84.196 0.0 1259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02779 5 20102146 20107970 Pste5g02779 5 20102146 20107970 ECH