Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02761 CTTAGGCCAATGCCAGCAGTGCACCAAGCACAAGGTGGTTCACCTATATTAACTCCACGCCTAGTGCCACAGCAGTTCAATTCATAGTCAAAAGAGATATGGGAAGGTCTCCTTGTTGTGAGAAAGTGGGATTGAAGAAGGGAAGGTGGATGGCGGAGGAGGATGAAATTTTGACCAAGTACATTCAGGCCAATGGAGAAGGCTCTTGGAGATCATTGCCAAAAAATGCAGGATTGTTAAGATGTGGGAAGAGTTGCAGACTAAGGTGGATTAACTATTTGAGAGCTGATCTCAAAAGAGGAAACATTTCTGTTGAGGAGGAAAGTATCATTGTCAAGTTGCATGCTTCGTTTGGCAATAGGTGGTCGTTGATAGCAAGTCACTTGCCTGGAAGAACGGACAACGAGATAAAAAACTATTGGAACTCTCATTTAAGCAGGAAAATATTCAGTGTTGGAGGGACAGCTACTGAAGATGTTATGAGATTACCCCCAAAGCGCAAACGTGGTAGAACCAGCCGTTGGGCCATGAAGAAGGACAAAGCCTATAAAATTGATCACACAACAACAATTCCTCTCCCACCAACCCCTCCACTTGAGACCGAGAAGTGTTCCTCCAACATTATAATGGAACATGAAAATACTACTGCTGAGGAAGAAATAGTGAAGGACAAGATGTGGGGACTGTATGAGGAGCAAGTAATTAAAGAGGGAGAGGTTTTGAGTATTCAATCTTTAAATGATATCATGGACAATTGCTGGCCGGAAGCTAGTACTGGGCTTTGGACCAATAATGTTGTAGGGAATGAAATAAGTGATGACAAGTTTACCCACATTATCATACCCAATGACAATGAGTTACGTTCTTCCTCTTCCGTCACTTCTTCGGCCTTGCCCTTGGATCAAAACCTTCTCACTTGGCTTTGGGAAGATGAAGACTGGGAAAAAGATTTTCAGAATTTTGGAGAGATTGACACTGACAAACAAAATGCTATGGTTGATTGGTTTCTCTCTTCAGCTTAAGCACCCTATTTTTCTTTCCCTTCCTGCTTTTTTCGGCTGTAAAATCTATGAACGTCGAACCATTTTGTCTTATTAGCCAGTTTGGCTTGAATATGTAGATAGAGTAGTACTACACAGACGTGTTTCTATGTCCATCTCGATTCTTGCATTATTAATCAGTTATAGTTATCAATAAAATGCTCT 1205 0.4149 MGRSPCCEKVGLKKGRWMAEEDEILTKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISVEEESIIVKLHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIFSVGGTATEDVMRLPPKRKRGRTSRWAMKKDKAYKIDHTTTIPLPPTPPLETEKCSSNIIMEHENTTAEEEIVKDKMWGLYEEQVIKEGEVLSIQSLNDIMDNCWPEASTGLWTNNVVGNEISDDKFTHIIIPNDNELRSSSSVTSSALPLDQNLLTWLWEDEDWEKDFQNFGEIDTDKQNAMVDWFLSSA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02761 307 Gene3D - 11 67 - -
Pste5g02761 307 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste5g02761 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste5g02761 307 CDD SANT 16 61 IPR001005 -
Pste5g02761 307 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste5g02761 307 FunFam Myb transcription factor 71 116 - -
Pste5g02761 307 Gene3D - 71 116 - -
Pste5g02761 307 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pste5g02761 307 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste5g02761 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste5g02761 307 SMART sant 66 114 IPR001005 -
Pste5g02761 307 SMART sant 13 63 IPR001005 -
Pste5g02761 307 CDD SANT 71 112 IPR001005 -
Pste5g02761 307 FunFam Myb transcription factor 11 67 - -
Pste5g02761 307 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste5g02761 307 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02761 Pste-Chr5 19839309 19844183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02761 1 190 MYB Transcription Factor Family AT2G47460 59.512 2.50e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste5g02761 Myb_DNA-binding 7.9e-11 CL0123