Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02747 CAAAAACTTGGAGGATTGGTGTTGTTGCTGGTGGCAGAGCGTTGCAGGGGAACAAAGCAGAGACAGAGAAAGAGGCATTGCCTGAAATTGAATTGAATGGCAACGAGAAATCGAACTGTAGAGTTCAGAAAGCATAGAGACGCGGTGAAGAGCGTGCGCGCTCCTCTCTCCTCCTCAGCATCTGCTTCCACCGGTCCCGTCATCGAAATGGTCACCACTTCGCTTCTTTCTTCCAAATCCAATCGATCCTCTTATGCCCCACTAAGCACCGAGGAACCTTCTCCCTCCACCTCTAGGGATGCATTTACTGTGGGATTGCCGCCATCTTGGGTGGATGATTCAGAAGAAATAGCTACGAATATACAACGTGCTCGGGTTAAAATATCTGAGTTAACCAAAGCTCATGCGAAGGCTTTAATGCCTTCCTTTGGGGATGGTAAAGAGGATCAGCGCCTTATTGAGACTCTCTCCCAAGAAATTACGTCTCTCCTCAGAAAGTCTGAAGTCAGGCTAAAAAGACTTTCTGCTGCTGCTGGATCTTCCGAGGATTCTAATGTTAGAAAAAATGTGCAGCGTTCCCTTGCTACAGACCTTCAGAACCTATCAATGGATCTCCGGCGAAAACAGTCAGCATATTTGAAACGTTTGCAGCAGCAAAAAGAGGTTGCAACTTTTCATGTGTAG 684 0.4693 MATRNRTVEFRKHRDAVKSVRAPLSSSASASTGPVIEMVTTSLLSSKSNRSSYAPLSTEEPSPSTSRDAFTVGLPPSWVDDSEEIATNIQRARVKISELTKAHAKALMPSFGDGKEDQRLIETLSQEITSLLRKSEVRLKRLSAAAGSSEDSNVRKNVQRSLATDLQNLSMDLRRKQSAYLKRLQQQKEVATFHV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02747 195 SMART SynN_4 69 185 IPR006011 GO:0016020
Pste5g02747 195 MobiDBLite consensus disorder prediction 44 68 - -
Pste5g02747 195 SUPERFAMILY t-snare proteins 73 190 IPR010989 GO:0016020|GO:0016192
Pste5g02747 195 Gene3D - 75 193 - -
Pste5g02747 195 MobiDBLite consensus disorder prediction 1 19 - -
Pste5g02747 195 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02747 Pste-Chr5 19693451 19695838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02747 1 189 SNARE and Associated Proteins AT5G26980 71.134 8.48e-88 259