Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02736 ATGGACAATAACATTTGTGGTGAAACCTCAGAGCATTTATAAGTGATTCAGCTTAATTGTGGAAATAGAAGACCCCAAAGAAATCTCTGGAACTTTCTGGCTGGATAGGATCTTTGGCTTCCAAACCTTCTACGCACCAAAATGTTGGGACATATTTATATGTTTTTCCAACTTTTCATTGCTGACTGAAATAACAAGAACAAGTATATATGCATTCCACCTTTGGTTTAAATTGTTGCAACGTGGAAAGATGTCCAGCACCGTGGAGTCGAACGGCGCCGTTTGCTATTATTCAGTGCTTGGCATTCGCAAGCATTCCACCGATGACGAAATTCGACGCGCTTATCGTAAGATGGCTCTGAAGTGGCATCCTGATAGGTGGATAAAGGACCCAATACTTGCGCTAGAAGCGAAAAACCGATTTCAGCACGTTCAAGAGGCTTATTCAGTTTTGTCAAATAAAGGGAAGAGAAGGATATACGATGCTGGCTTGTTTGGTCTGATTGGAGAGGACGAGGATGAGGTGGGTGTCCGTGTTTCCCTTCTTTCTTCTATTAATTTCACAACCACTGTGTCTCAGGCCACACCAACCACTTTTCTGTTTCATCTATTACACATTTTGGAGGCTGAATTTCACAACTATATATGGAAATTACAGGGATTTGTTGATTTCATGCAAGAAATGGCCTTGATGATGCAGAGAGTACCATCAAAGGATGAGAAAGGCATGTTGGAGGATCTTCAAGGATTGTTAATGGATATGATGGCAGATAATAAAGGGATGGAAAAGTCTGGGTCAAGCTGGAATTCATCTCCATGTCCTACAAAAAGGACACGATTCTTATGATTCTCGCGTTACAATTCAATTAATTATTTAGGTCATCACCTTTTATCAATATGTAGTTTTCACAGTTCAGAGTTATTGACATTGTTAATATCTCATCATTTAACCGAGTAAATATATCTTCTGCTTTTAGACTTGCCTGTTACCAAATGTCCCAAGAATAGGAATATGGAGATGAATAGATTCATGAGCATGAGTAGTATTAATAATTTACAAATGGTAATTTCAATCGAATCATTTTGAAAAGATTTCATCTAATTATTTATTATTTATTAATTATTAACTCCTCTACCAATTACGGGCATAATCAATATTTTTCTTCAATAAAATGTGGTGAAAATAAATAGATTATAATGATAAATAATGATGATCAAGTC 1221 0.3677 MSSTVESNGAVCYYSVLGIRKHSTDDEIRRAYRKMALKWHPDRWIKDPILALEAKNRFQHVQEAYSVLSNKGKRRIYDAGLFGLIGEDEDEVGVRVSLLSSINFTTTVSQATPTTFLFHLLHILEAEFHNYIWKLQGFVDFMQEMALMMQRVPSKDEKGMLEDLQGLLMDMMADNKGMEKSGSSWNSSPCPTKRTRFL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02736 198 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pste5g02736 198 MobiDBLite consensus disorder prediction 178 198 - -
Pste5g02736 198 Pfam DnaJ domain 13 78 IPR001623 -
Pste5g02736 198 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pste5g02736 198 SUPERFAMILY Chaperone J-domain 9 82 IPR036869 -
Pste5g02736 198 PANTHER PUTATIVE, EXPRESSED-RELATED 8 181 - -
Pste5g02736 198 SMART dnaj_3 11 73 IPR001623 -
Pste5g02736 198 Gene3D DnaJ domain 2 92 IPR036869 -
Pste5g02736 198 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pste5g02736 198 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pste5g02736 198 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pste5g02736 198 MobiDBLite consensus disorder prediction 179 198 - -
Pste5g02736 198 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02736 Pste-Chr5 19540553 19542204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02736 12 79 C2H2 Transcription Factor Family AT1G74250 47.826 5.08e-13 65.1