Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02733 GTTATATAGTGCTTCCCCTCCACATTCTGCGATAAGCTCAGCAGCTTCAGCATCAGTTGCAGGAAAAATGGTTTCTCTGAAACTGCAGAAGCGGCTCGCCGCAAGCGTTCTCAAGTGCGGCAGGGGAAAAGTGTGGCTCGACCCAAATGAAGTCAACGAAATCTCTATGGCCAATTCTCGGCAAAACATAAGGAAGCTGGTTAAGGATGGTTTTATTATCAGGAAGCCCACCAAGATTCACTCTCGATCGCGTGCCCGACGAATGAAGGAAGCCAAGAGGAAAGGACGTCACTCTGGCTATGGTAAGCGTAAGGGTACAAGGGAGGCAAGGCTTCCCACTAAAATCCTTTGGATGAGGAGAATGCGTGTGCTCAGACGCCTGCTTCGCAAGTACAGGGAATCTAAGAAGATTGACAAGCACATGTACCATGACATGTACATGAAGGTCAAGGGTAATGTTTTCAAGAACAAGAGGGTTTTAATGGAAAGCATTCACAAGTCGAAAGCTGAGAAGGCAAGAGAGAAGACCTTGTCTGATCAGTTTGAAGCCAAACGTGCCAAGAACAAGGCCAGCAGAGAAAGAAAACTTGCCCGGAGGGAGGAGCGATTGGCCCAAGGTCCTGGAGAGAAATCTGCTGCACCCAGTGCTCCAGCTGCTACAGCATCACAGCCAGCCCAAGCAACAAAGAAATCCAAGAAGTGAGCCACATATTGCTGTTAGAATTTTTGGGGCGGGCATCTTGAGTTATTATTGTTTTAAAGTAGTTTTGACGATTTTCGAGGAGTTTCTGTGTTGGTTTAGATCTTGTTTAATTTTATTATTATAACATTCTGTTCTCACCGTTTTTTGGCTGTTTTTGGTTTGGAGATCACATTGTTACGGAAATACTCTTGTTAATTCTCTTCTGGTTATGATTTTACTGTTCCTTATTCTCTTAACTGAATTGAATTGATTTATTT 960 0.4417 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREERLAQGPGEKSAAPSAPAATASQPAQATKKSKK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02733 211 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste5g02733 211 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Pste5g02733 211 FunFam Ribosomal protein L19 57 193 - -
Pste5g02733 211 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste5g02733 211 PANTHER 60S RIBOSOMAL PROTEIN L19 1 188 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pste5g02733 211 MobiDBLite consensus disorder prediction 194 211 - -
Pste5g02733 211 MobiDBLite consensus disorder prediction 57 85 - -
Pste5g02733 211 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Pste5g02733 211 Gene3D - 57 191 - -
Pste5g02733 211 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste5g02733 211 FunFam Ribosomal protein L19 1 56 - -
Pste5g02733 211 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Pste5g02733 211 MobiDBLite consensus disorder prediction 149 211 - -
Pste5g02733 211 MobiDBLite consensus disorder prediction 149 184 - -
Pste5g02733 211 Coils Coil 161 181 - -
Pste5g02733 211 MobiDBLite consensus disorder prediction 57 79 - -
Pste5g02733 211 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02733 Pste-Chr5 19487158 19489108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02733 1 211 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 84.834 1.16e-128 359
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02733 5 19487158 19489108 Pste5g02733 5 19487158 19489108 ECH