Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02723 CTTATAGCTAATGGCTTTCAAGAACTTGTCCGTTCTTACGCTCTGTGTTTCTCTTGTGCTATCCTTTTTGGCACCCATTTCCATAGCTGCTAATAACAGTTCAGTCGTTTCACCAGAAACTGTTTGCAACTCCACCGTAAACCCCTCCTTCTGTAAAACTGTGCTTGCTAATCAAAATGGCAACATCTTTGACTATGGTCGAATCTCTGTCCGAAAGTCCTTGTCCCAGTCCCGCAAATTCTTGAGCTTAGTAAATTCACTTCTTCAAGACACATCCTCTTTGTCTCTACCCACAATTGGCGCCCTTCAAGACTGTCAATTCCTTGCTGAACTAAACTTGGAATACTTATCAAACGCACTTACTGCTGTTGATAAAGCTAGCGATGTTCTTCCCACCACTCAAGCCGAAGACCAGCAAACCATGCTTAGTGCTGTTTTGACAAACGAAGAAACCTGTTTAGAAGGCTTGCAGAACACAGCTTCTGATCAAAGAGCGAAGAGTAATCTTTTCTCATCACTCTCTGATGACAAGAAGCTTCACAGTGTTTCCCTTGACTTGTTTACCAAGGGTTGGGTGCCTGAGAAGAAAGTCTTAACACCATGGCAAACCAATGGGAGACATTTGGGTTTTCGCAATGGTCGTTTACCATTGAAGATGTCAAACCGTGTACGTGCCATCTATGATTCTACCAGAGGTCGTCACGGGAGAAAACTACTTCAAGATAACACCCAAAGTGTATTGGTAAGTGACATTGTGGTTGTTAGCCAGGATGGAAGCGGAAACTTCACCACCATAAACGATGCTATAGCAGCTGCACCAAATAACACTGCTGCTAGTGATGGCTACTTTCTTATTTTTGTTACTCAAGGTGTCTATCAAGAATATATATCCATTGCCAAAAACAAAAAGTACTTGATGATGGTTGGAGATGGCATCAATCAAACCATCATCACTGGTGATCACAACGTTGTCGATAATTTCACAACATTCAACTCAGCAACATTTGCTGTGGTAGCACAAGGATTCGTGGCAGTTAACATGACATTCCGAAACACTGCTGGGCCAGCCAAGCACCAAGCAGTTGCAGTGAGAAACGGAGCGGATATGTCCACATTCTACAGCTGCAGCTTTGAGGGGTATCAAGACACCTTGTACACGCATTCTCTTAGACAGTTTTACCGTGAATGTGACATCTATGGAACCGTTGACTTCATATTTGGAAATGCTGCTGTTGTTTTTCAAGAATGTAACCTCTATCCCGGTCTTCCCATGAGTGGACAATTCAATGCCATAACTGCACAAGGCAGAACAGACCCAAATCAAAACACAGGCACTTCCATATATAACGCAACTATAAAAGCTAGTGCAGATTTGGCTCCTATAGTTAGTACGGTGAATACATACCTTGGGAGACCATGGAAAGAGTACTCAAGGACAGTTTTTATGCAGTGTTTCATGGATAATTTGATTCATACTTCTGGTTGGCGTGAGTGGAGTGGGGATTTTGCTCTCACCACATTGTACTATGCAGAGTATAATAACACGGGACCTGGTTCAAGCACTGCAAACCGAGTCACGTGGCCTGGTTATCATGTTATCAATGCTACTGACGCCGCTAATTTTACTGTTTCTAATTTTGTGGACGGTGATAGTTGGCTGCCTCAAACTGCTGATAATAACCATGCAATTGTTCCAACTGAAACCATATGCTACTCTGCCTTAAACCCATCTTACTGCAAATTTGTGCTTGCAAATCAAAATGGTAGCTTATATGACTATTGCCGCATTTCTGTTCGAAAGTCCTTGTCTCAGTCTCGTAAGTTCATGAACAAGATGTATTCATATCTTCAAAATCCCTCGTCTTTGTCTCAACCCACAATTCGTGCCCTTGAAGATTGCCAATTCCTTTCTGAACTAAACTTTGAATACTTATCAACAACACAGGACACTGTTGATAAAGCTAGCGATGTTCTTCCCACCTCTCAAGCAGACGATGTTCACACATTGCTTAGTGCTGTTTTGACCAATCAACAAACTTGTTTAGATGGTCTTCAAACTTCAGCTTCAGATCCAAGAGTGAAGAATGATCTCTCTTCCCAACTCTCGGATATTACGAAGCTTCATGGTGTCTCTCTTTATATGTTCACCAAGGCTTGGATTCCTGAGAAGAAAATCTCAACATCATGGCAACACCATGGGGGCATCCAAAATGATCATTTACCCTTGAAGATTTCAAACAAAGTACGTGCCATTTATGATTCCGCTAGAGGCCACCGGAGAAAACTACTTCAGACAATGGATGGCAATGAAAGCATAGTGGTGAGTGATATTGTGGTGGTTAGTAAGGATGGAAGCGGAAACTTTACCACTATCAACGACGCCATAGCTGCTGCACCAAATAACACGGCTGCCACCGATGGATACTTCATCATTTTTATCACCGAGGGCATATATCAAGAGTATGTATCTATAGCCAAAATCAAGAAGTTCTTGATGTTAATTGGAGATGGAATCAATAGGACAATTATCACTGGCGATCGCAACGTTGTTGATGGCTTTACAACATTCAACTCAGCCACATTTGCTGTGGTAGGACAAGGGTTTGTAGCAATGAACATAACATTCCGCAACACTGCTGGGCCAAGTAAGCATCAAGCAGTTGCAGTAAGAAATGGAGCGGATATGTCCACCTTCTATAGCTGTAGCTTTGAAGGGTACCAAGACACTTTATACACGCATTCTCTGAGGCAGTTTTATAGAGAATGTGACATATATGGCACAGTTGACTTCATATTTGGAAATGCAGCTGTTGTTTTGCAGAACTGTAACATGTATCCTCGCCTCCCCGATAGTGGACAGTTCAATGCCATCACTGCGCAAGGTCGAACTGATCCAAATCAAAACACTGGCATTTCCATACAAAATGCAACCATAAAAGCAGCACAGGATTTGGCTCCCATCGTTGGCTCTGTGAAAACATATCTTGGGAGACCATGGAAGGAGTACTCAAGGACGATTTATATGCAGTGTTTCATGGATAGTTTGATAGCTCCTGCTGGTTGGCATGAATGGAGTGGGAATTTTGCACTCGGCACCTTGTACTATGCAGAGTATGGTAACATGGGTCCTGGTTCAAACACTGCCAACCGAGTCAACTGGCCAGGCTACCATGTTATTGAGGCTACTGATGCAGCGAATTTTACTCTCTCTAACTTCTTAGATGGAGATGATTGGGTGCCTCAAACTAGCGTACCGTACCAGATGTCTTTGTAA 3274 0.4273 MAFKNLSVLTLCVSLVLSFLAPISIAANNSSVVSPETVCNSTVNPSFCKTVLANQNGNIFDYGRISVRKSLSQSRKFLSLVNSLLQDTSSLSLPTIGALQDCQFLAELNLEYLSNALTAVDKASDVLPTTQAEDQQTMLSAVLTNEETCLEGLQNTASDQRAKSNLFSSLSDDKKLHSVSLDLFTKGWVPEKKVLTPWQTNGRHLGFRNGRLPLKMSNRVRAIYDSTRGRHGRKLLQDNTQSVLVSDIVVVSQDGSGNFTTINDAIAAAPNNTAASDGYFLIFVTQGVYQEYISIAKNKKYLMMVGDGINQTIITGDHNVVDNFTTFNSATFAVVAQGFVAVNMTFRNTAGPAKHQAVAVRNGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQECNLYPGLPMSGQFNAITAQGRTDPNQNTGTSIYNATIKASADLAPIVSTVNTYLGRPWKEYSRTVFMQCFMDNLIHTSGWREWSGDFALTTLYYAEYNNTGPGSSTANRVTWPGYHVINATDAANFTVSNFVDGDSWLPQTADNNHAIVPTETICYSALNPSYCKFVLANQNGSLYDYCRISVRKSLSQSRKFMNKMYSYLQNPSSLSQPTIRALEDCQFLSELNFEYLSTTQDTVDKASDVLPTSQADDVHTLLSAVLTNQQTCLDGLQTSASDPRVKNDLSSQLSDITKLHGVSLYMFTKAWIPEKKISTSWQHHGGIQNDHLPLKISNKVRAIYDSARGHRRKLLQTMDGNESIVVSDIVVVSKDGSGNFTTINDAIAAAPNNTAATDGYFIIFITEGIYQEYVSIAKIKKFLMLIGDGINRTIITGDRNVVDGFTTFNSATFAVVGQGFVAMNITFRNTAGPSKHQAVAVRNGADMSTFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNMYPRLPDSGQFNAITAQGRTDPNQNTGISIQNATIKAAQDLAPIVGSVKTYLGRPWKEYSRTIYMQCFMDSLIAPAGWHEWSGNFALGTLYYAEYGNMGPGSNTANRVNWPGYHVIEATDAANFTLSNFLDGDDWVPQTSVPYQMSL 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02723 1087 Pfam Plant invertase/pectin methylesterase inhibitor 36 182 IPR006501 GO:0004857
Pste5g02723 1087 Pfam Plant invertase/pectin methylesterase inhibitor 564 704 IPR006501 GO:0004857
Pste5g02723 1087 CDD PMEI-like_3 37 188 - -
Pste5g02723 1087 SMART PMEI_2 30 183 IPR006501 GO:0004857
Pste5g02723 1087 SMART PMEI_2 558 711 IPR006501 GO:0004857
Pste5g02723 1087 FunFam Pectinesterase 564 714 - -
Pste5g02723 1087 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Pste5g02723 1087 Pfam Pectinesterase 775 1073 IPR000070 GO:0030599|GO:0042545
Pste5g02723 1087 SUPERFAMILY Pectin lyase-like 770 1084 IPR011050 -
Pste5g02723 1087 CDD PMEI-like_3 565 716 - -
Pste5g02723 1087 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 565 714 IPR035513 -
Pste5g02723 1087 SUPERFAMILY Pectin lyase-like 245 554 IPR011050 -
Pste5g02723 1087 FunFam Pectinesterase 242 559 - -
Pste5g02723 1087 Gene3D - 243 559 IPR012334 -
Pste5g02723 1087 Gene3D - 769 1087 IPR012334 -
Pste5g02723 1087 FunFam Pectinesterase 769 1087 - -
Pste5g02723 1087 Gene3D Invertase/pectin methylesterase inhibitor family protein 563 714 IPR035513 -
Pste5g02723 1087 PANTHER PECTINESTERASE 563 1077 - -
Pste5g02723 1087 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 186 IPR035513 -
Pste5g02723 1087 FunFam Pectinesterase 36 186 - -
Pste5g02723 1087 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 186 IPR035513 -
Pste5g02723 1087 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Pste5g02723 1087 ProSitePatterns Pectinesterase signature 2. 921 930 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02723 Pste-Chr5 19325228 19338110 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02723 6 554 Carbohydrate Esterase AT4G02330 58.803 0.0 652