Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02720 GACATATTATTAACACACATAAATCAGTGTATCAAACGAACATGGCTTGCAAGGTTTGTTATTGTTTGTGGTTATTTCTGATTCTGCTAGCGCTATTTGGTTCAATAGTTTCGGCAGACAGCGTTCAAAATCCCACAAGTCGTGTGTCTCCCGGAACGGCATGCAAATCCACCCCAGACCCAAGCTATTGCAAATCCGTTCTCCCTCCTGATCAAAACGGCAACGTTTACGACTATGGGAGGATCTCCGTGAAAAAGTCAGTCTCACAAGCCCGCAAGTTCTTGAATCTAGTTGAGAAATACATCCAACGTGGGTCTTTTCTTTCCGCCACCGCAATACGAGCTCTTCAAGATTGCCGCACTCTCGGGGAACTCAACTTGGATTTCCTCTCCAGTTCCTTCCAAACCGTCAACAAGACAACGAGGTTTCTTCCCAGCTTTCAAGCCGATGACATCCAAACCCTACTCAGCGCCATTCTGACCAACCAGCAAACATGCTTGGATGGTCTCAAAGACACTGCCTCTGCTTGGAGCATCAGAAACGGTCTCACTGTCCCTCTCTCCAACGACACCAAACTCTACACTCTCTCTCTCGCCTTCTTCACCAAGGCTTGGGTTCCCAGAACCAGAACCAGAACCAACACCAACACCCACACCCACACCAAGAAACAACTGGGATTCCGAAACGGGCGTTTGCCGCTTAAGATGTCCAGCAGAACCCGCGCCATCTATGAGTCGGTGAGCAGCAGAAAGCTCCTTGAGGCCACCGTTGGTGAGCAGGTTGTGGTGACCGATATTGTTACTGTCAGCCAAGATGGAACTGGCAACTTCACCACTATCACTGATGCCATTGCCGCAGCTCCTAACAAATCTGTCTCTACTGATGGATACTTCCTTATCTATGTCACTGCCGGTCTGTACCAGGAAAATGTATCCATTGATAAGAAGAAGACATATTTGATGATGGTCGGGGACGGTATCAACAAGACAATTATCACTTCCAATCGTAGTGTCGTTGATGGCTGGACAACCTTCAGCTCCGCAACATTTGCTGTGGTTGGACAAGGATTCGTGGGTGTGAATATGACATTCCGAAACACTGCGGGGGCGGTGAAGCACCAAGCAGTTGCAGTTCGAAACGGAGCAGATTTGTCGACGTTTTACAGTTGCAGCTTCGAGGGGTACCAAGACACACTGTACGTACATTCCCTGAGACAATTTTACCGGGAATGCGACATCTACGGCACAGTAGATTTCATATTCGGAAATGCCAAGGTTGTGTTCCAAAGTTGCAACATATATCCTCGTCTCCCCATGAGTGGTCAATTCAATGCCATCACCGCACAGGGAAGAACAGACCCAAACCAAGACACGGGGATTTGTATCCATAACTGTACCATAAGAGCAGCTGAAGATTTAGGTGGCGTGGCAACGTATTTGGGAAGGCCTTGGAAGGAGTATTCTAGAACGGTTTATATGCAAAGTTTTATGGACAGTGTGATCAACACAGCTGGGTGGCGTGAATGGGACGGTAATTTTGCATTAACCACTTTGTATTACGCAGAGTACAGCAATAGTGGGCCAGGCTCCAGCACCGCCAACAGGGTGACGTGGCCCAGTTATCATGTCATTAATTCCACCGATGCTTCTAACTTTACAGTGTCCAATTTTTTGCTTGGAGATGATTGGATACCCCAGACAGGAGTCACTTATACCGATAACTTCATCTAGAAAATCTACATCCACTGGATCTGGATTATTCACACATTCACTTTCTTTTATTTTTTTCCTTTGCCAAATGTTCAAATCATATTGGTTCATTGTGATTTACTTATAAAGCAAACATTATATTATTCGTTTCTGTCCCATTCATAATTATTTAGTTATTATTTAATCTTTTTGTCTCTTTCCTGCACATCAACCACTCATTTTGACTTTTTCCATCTTAAAAGAACAAGTGTAATTATCACTTCTCATTTTTCCCATAAATACAATAACTGACCAAAAACTAAAATAAATAATTA 2023 0.4459 MACKVCYCLWLFLILLALFGSIVSADSVQNPTSRVSPGTACKSTPDPSYCKSVLPPDQNGNVYDYGRISVKKSVSQARKFLNLVEKYIQRGSFLSATAIRALQDCRTLGELNLDFLSSSFQTVNKTTRFLPSFQADDIQTLLSAILTNQQTCLDGLKDTASAWSIRNGLTVPLSNDTKLYTLSLAFFTKAWVPRTRTRTNTNTHTHTKKQLGFRNGRLPLKMSSRTRAIYESVSSRKLLEATVGEQVVVTDIVTVSQDGTGNFTTITDAIAAAPNKSVSTDGYFLIYVTAGLYQENVSIDKKKTYLMMVGDGINKTIITSNRSVVDGWTTFSSATFAVVGQGFVGVNMTFRNTAGAVKHQAVAVRNGADLSTFYSCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAKVVFQSCNIYPRLPMSGQFNAITAQGRTDPNQDTGICIHNCTIRAAEDLGGVATYLGRPWKEYSRTVYMQSFMDSVINTAGWREWDGNFALTTLYYAEYSNSGPGSSTANRVTWPSYHVINSTDASNFTVSNFLLGDDWIPQTGVTYTDNFI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02720 562 Pfam Pectinesterase 253 547 IPR000070 GO:0030599|GO:0042545
Pste5g02720 562 CDD PMEI-like_3 39 191 - -
Pste5g02720 562 NCBIfam pectinesterase inhibitor domain 11 188 IPR006501 GO:0004857
Pste5g02720 562 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Pste5g02720 562 PANTHER PECTINESTERASE 19 551 - -
Pste5g02720 562 Gene3D - 247 561 IPR012334 -
Pste5g02720 562 SMART PMEI_2 32 186 IPR006501 GO:0004857
Pste5g02720 562 FunFam Pectinesterase 38 189 - -
Pste5g02720 562 SUPERFAMILY Pectin lyase-like 250 558 IPR011050 -
Pste5g02720 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 189 IPR035513 -
Pste5g02720 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Pste5g02720 562 FunFam Pectinesterase 246 561 - -
Pste5g02720 562 Pfam Plant invertase/pectin methylesterase inhibitor 39 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02720 Pste-Chr5 19305252 19307779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02720 9 562 Carbohydrate Esterase AT4G02330 61.996 0.0 721