Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02699 ATAACCCTGACCCTATGTATTCTGGTCCCTATAAGTTTTGTCCCACCACACTTTAATCCTCACTGATTCCTATAAATTCATCAGAATGTCGCCACAACATAGTTCAAGGTCATGAAAGAAAAGCTGGTTTTGGAAGCAAGTCAAGAAGGCAGAGAAACCATACTCTATTAGAGAAGTGGGTCTCCGAATCTCACTATTGTTTGTTTCTCAAGAAAAGCGTGTGTCCAAAAATGGGTAGGGGTCAAAAAGGTGATGTGGCTAACCAGGAGAAAAACCAGAACAAGAAAAATGGGTCTGTTGGGTTTGGGTCCATTTTCATGCATGCCGATTCCATAGATTGGTTTCTAATGATCTTAGGTACCATTGGATCTGTTGGGGAAGGCATGTCCACCCCTCTAGTGTTGCTTATCAGTAGTCGCATGATGAATAGCATTGGAGGTTCCTCCAACATGTCTGGCCACACTTTCATCCATAGCATCAATAAGAATGCTGAGGCATGGTTATGTTTGGCTGCTGCCTCTTTGGTGGTTTGCTTCATGGAGGGATTTTGTTGGACTAGAACAAGCGAAAGACAAGCAGCAAGAATGAGATGCAGGTATCTGAAAGCAGTGCTCAGACAAGATATTGCGTACTTCGATTTGCATGTGACAAGCACGTCAGAGATCATCACTAGCGTCTCCAACGACAGCCTCGTAATTCAAGATGTTATTAGTGAAAAGCTACCCAATTTCTTGATGAACATTACATTGTTCATCGGGAGCTACATAGCTTCCTTTGCATTGCTGTGGAGGTTGGCCATAGTGGGGTTTCCCTTCGTGATTCTTCTGGTGATTCCGGGCATAATCTACGGTAAAACGCTTCTGGGGTTGTCGAGTAAGATCAGAGACGAGTACAACCAAGCCGGAACAGTAGCAGAACAAGCGATTTCATCAATCAGAACGGTTTACTCTTTCGTGGGGGAAAATAGAACCCTGAACGCGTTTTCAAACGCGCTTCAGGGAACGGTTAAGTTGGGCCTCAGACAAGGCTTGGCCAAAGGCTTAGCCATTGGCAGCAATGGCCTCGTTTTCGGCATGTGGTCTTTTCTCTGCTACTATGGTAGCAGATTGGTCGTTTATCATGGCGCCAAAGGAGGAACCGTTTTTGCAGCCGGAGCCGCTATCGCTGTCGGCGGATTGTACTTTTCAGAAGCGGGAGCCGCAGCAGAGCGCATAAAGGAAGTGATAAAAAGGGTTCCGCAGATAGATACGGAGAACAAGGACGGAGAAATTCTAGCAACGGTAAACGGAGAAGTGGAATTTGACGGAGTAGAATTCTCATACCCGTCAAGGCCAGAAACCGTTATTCTAAACCAATTCTCCCTCAAAATCCCGGCAGGGAAACGAGTCGCGTTGGTTGGAGCCAGCGGATCAGGAAAATCAACGGTAACCGCTTTGTTACAGCGCTTCTACGACCCCACCGCAGGAGAAGTGCGTTTAGACGGAGTAGAAATTCGAAAGCTTCAGGTGAAGTGGATTAGGTCCCAGATGGGGTTGGTGAGCCAGGAGCCTGCTCTGTTCGCAACAAGCATTAAAGAGAACATACTTTTCGGCAAAGAGGATGCGACGGAGGAAGAAGTGGTTGCAGCGTCAAAAGCTGCCCATGCTCATAGTTTCATTCAGCTTCTCCCTAACGGTTACCATACACAGGTGGGGGAGAGAGGGGTTCAGCTGTCAGGGGGACAAAAACAGAGGATAGCGATTGCGAGGGCGATAATAAAGAAACCGCGAATTCTTCTTCTGGACGAAGCAACAAGCGCACTGGACACGGAGTCCGAACGACTGGTCCAAGAAGCATTGGACAATGCATCATCGGGTTGCACCGCCATCATCATCGCGCACCGCTTGTCGACGATCCAAAACGCCGACCTCATCGCGGTGGTTGGCGGCGGCAGAGTCCTCGAAATAGGCTCGCACCAGGAGCTCATCCGCAGCGACAGAGGCGCTTACGCCGCCGCAATCCGCCTCCAGCAGCAGCAAATGGAAACCGACAGGGAGAACCTGACCGCGGGAAAAACGGTTACGGCGGTTACACCCGACAATCCGGTCTCGCGCACCACGTCATCAAACACCACAAGCCAAGTGAGTCCTGGTAATGATAACGATGATGATAGCAATAATAATAATTATAATGCAACGGAAGGAGAGGAAAAGGTTAAAGCGCCGTCGTTTCGGAGGCTGTTGTCGTTGAGTAAACCTGAGTGGAAACAGGTCCTTTTGGGGTGTTTAAACGCAATTGTGTTTGGCGCAGTTCAGCCTCTTTACGCGTTTACAATGGGGTCCACAATACTTTTGTATTTTAACCCTGATCGTGATGAGATAATGAGGAAAACCAGGAACTATTCGTTCGTATTTGTTGGTCTCTTTGTGGTGTCTTTCCTCACCAACGTTGGCCAGCACTACTGCTTCGGTTACATGGGAGAATACTTGACCAAACGAGTCAGAGAGACTGTGTTCTCCAAAATCCTCACTTTTGAAATCGGGTGGTTCGATTTGAACGAGAACTCCAGTGGCGCCATCTGTTCCAGGCTTGCCAAAGATGCTAATGTGGTGAGGTCTCTAGTGGGAGATAGAGTGGCATTACTGGTACAAACATTTTCAGCGGTGACAACAGCCTACACAATGGGTCTCATCCTTTCGTGGAGGCTTTCCATTGTCATGATAGCCGTACAACCTATCATGGTAGGGTGCTTTTACACAAAGCGTGTGCTTCTTAAGACCATGTCCAAAAAGTCAGTGAAGGCCCAGCTTGAGAGTAGTAAGATAGCTTCTGAAGCAGTATCGAATCTCAGAACTGTCACAGCGTTTGGTTCACAGGACAGGATTCTTAGCATGCTGGAGAAGGCCCAAGAGGGCCCAAGTAGAGAGAATGTTAGGCAATCATGGTTTGCTGGGCTTGGGCTTGGGGTTTCCCAAATGGTTCTTTCTTGTATTTGGGCATTAAACTTTTGGTATGGTGGCAGGCTTATATCTAATGGCTACATAAGCATAAAAACTTTCTTCGAGAGCTTCATGGTTTTGGTTAGCACCGGAAGGATCATTGCTGATGCAGGAAGCATGACCACGGATATTGCAAGAGGTGCTGATGTAGTGAGTTCCATTTTTGGGATCATAGATAGGAGCACAAAAATTGATGCTGATGAGCCAAATGGGTACAAGGCAGAGAAATTGGTGGGTGAAATAGAGCTTCATGATGTGCATTTTGTGTACCCTGCTAGGCCTGATGTGGGTATCTTCCAAGGTTTCAGCATAAAAATGGAGGCAGGGAAATCAACGGCATTGGTGGGGCAAAGTGGGTCTGGAAAATCGACCATCATAGGGCTAGTAGAGAGGTTTTATGATCCACTAAAAGGGGTGGTGACAATAGATGGTGTGGACATAAAATCGTATAACCTAAAGTCACTAAGGAAGCACATAGCACTTGTGAGTCAAGAGCCAACGTTGTTTGGTGGGACCATAAGGGAGAACATAGCATATGGAAGCAGTGAGAGTGTGGATGAGAGTGAGATCATAGAGGCAGCAAAAGCAGCGAACGCTCATGATTTCATAGCAGGGTTAAAGGAGGGGGGTCAAAAGCAAAGAATAGCAATAGCAAGGGCCATACTGAAGAACCCTAAGGTGTTGCTATTGGACGAGGCCACAAGCGCATTAGATGGTCAATCAGAGAAGGTGGTGCAAGAAACATTGACGAGGGTAATGGTAGGGAGGACCAGCGTGGTGGTGGCACATAGGTTGAGCACCATTCACAATTGTGATGTTATAGCTGTGTTGGAAAAGGGGAGGGTGGTGGAGATTGGAACCCACTCGTCCTTGTTGGACAAAGGACCACGTGGAGCTTATTACTCTTTGGTGAGTCTTCAGACGAGACATCCAGCCATGCCCAATACTAAAGCAACCCACTCTTGCAAT 3947 0.4748 MGRGQKGDVANQEKNQNKKNGSVGFGSIFMHADSIDWFLMILGTIGSVGEGMSTPLVLLISSRMMNSIGGSSNMSGHTFIHSINKNAEAWLCLAAASLVVCFMEGFCWTRTSERQAARMRCRYLKAVLRQDIAYFDLHVTSTSEIITSVSNDSLVIQDVISEKLPNFLMNITLFIGSYIASFALLWRLAIVGFPFVILLVIPGIIYGKTLLGLSSKIRDEYNQAGTVAEQAISSIRTVYSFVGENRTLNAFSNALQGTVKLGLRQGLAKGLAIGSNGLVFGMWSFLCYYGSRLVVYHGAKGGTVFAAGAAIAVGGLYFSEAGAAAERIKEVIKRVPQIDTENKDGEILATVNGEVEFDGVEFSYPSRPETVILNQFSLKIPAGKRVALVGASGSGKSTVTALLQRFYDPTAGEVRLDGVEIRKLQVKWIRSQMGLVSQEPALFATSIKENILFGKEDATEEEVVAASKAAHAHSFIQLLPNGYHTQVGERGVQLSGGQKQRIAIARAIIKKPRILLLDEATSALDTESERLVQEALDNASSGCTAIIIAHRLSTIQNADLIAVVGGGRVLEIGSHQELIRSDRGAYAAAIRLQQQQMETDRENLTAGKTVTAVTPDNPVSRTTSSNTTSQVSPGNDNDDDSNNNNYNATEGEEKVKAPSFRRLLSLSKPEWKQVLLGCLNAIVFGAVQPLYAFTMGSTILLYFNPDRDEIMRKTRNYSFVFVGLFVVSFLTNVGQHYCFGYMGEYLTKRVRETVFSKILTFEIGWFDLNENSSGAICSRLAKDANVVRSLVGDRVALLVQTFSAVTTAYTMGLILSWRLSIVMIAVQPIMVGCFYTKRVLLKTMSKKSVKAQLESSKIASEAVSNLRTVTAFGSQDRILSMLEKAQEGPSRENVRQSWFAGLGLGVSQMVLSCIWALNFWYGGRLISNGYISIKTFFESFMVLVSTGRIIADAGSMTTDIARGADVVSSIFGIIDRSTKIDADEPNGYKAEKLVGEIELHDVHFVYPARPDVGIFQGFSIKMEAGKSTALVGQSGSGKSTIIGLVERFYDPLKGVVTIDGVDIKSYNLKSLRKHIALVSQEPTLFGGTIRENIAYGSSESVDESEIIEAAKAANAHDFIAGLKEGGQKQRIAIARAILKNPKVLLLDEATSALDGQSEKVVQETLTRVMVGRTSVVVAHRLSTIHNCDVIAVLEKGRVVEIGTHSSLLDKGPRGAYYSLVSLQTRHPAMPNTKATHSCN 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02699 1239 CDD ABC_6TM_Pgp_ABCB1_D2_like 664 980 - -
Pste5g02699 1239 Pfam ABC transporter transmembrane region 40 305 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g02699 1239 Pfam ABC transporter transmembrane region 675 945 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g02699 1239 Gene3D ABC transporter type 1, transmembrane domain 645 985 IPR036640 GO:0005524|GO:0016020
Pste5g02699 1239 FunFam Multidrug resistance protein 1A 987 1224 - -
Pste5g02699 1239 Pfam ABC transporter 1016 1151 IPR003439 GO:0005524
Pste5g02699 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g02699 1239 MobiDBLite consensus disorder prediction 598 650 - -
Pste5g02699 1239 SUPERFAMILY ABC transporter transmembrane region 36 506 IPR036640 GO:0005524|GO:0016020
Pste5g02699 1239 ProSitePatterns ABC transporters family signature. 494 508 IPR017871 GO:0005524|GO:0016887
Pste5g02699 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 591 IPR003439 GO:0005524
Pste5g02699 1239 FunFam ABC transporter B family member 4 345 601 - -
Pste5g02699 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 681 962 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste5g02699 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 987 1223 IPR027417 -
Pste5g02699 1239 FunFam Putative ABC transporter B family member 8 637 985 - -
Pste5g02699 1239 PANTHER ABC TRANSPORTER B FAMILY 8 687 IPR039421 -
Pste5g02699 1239 CDD ABC_MTABC3_MDL1_MDL2 997 1223 - -
Pste5g02699 1239 Pfam ABC transporter 373 522 IPR003439 GO:0005524
Pste5g02699 1239 Gene3D - 345 594 IPR027417 -
Pste5g02699 1239 SMART AAA_5 1024 1183 IPR003593 GO:0016887
Pste5g02699 1239 SMART AAA_5 382 591 IPR003593 GO:0016887
Pste5g02699 1239 SUPERFAMILY ABC transporter transmembrane region 656 976 IPR036640 GO:0005524|GO:0016020
Pste5g02699 1239 MobiDBLite consensus disorder prediction 598 653 - -
Pste5g02699 1239 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 305 - -
Pste5g02699 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 997 1220 IPR003439 GO:0005524
Pste5g02699 1239 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Pste5g02699 1239 FunFam ABC transporter B family member 1 27 354 - -
Pste5g02699 1239 Gene3D - 987 1230 IPR027417 -
Pste5g02699 1239 Gene3D ABC transporter type 1, transmembrane domain 28 601 IPR036640 GO:0005524|GO:0016020
Pste5g02699 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 345 593 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02699 Pste-Chr5 18997268 19006483 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02699 33 594 Calmodulin-binding Proteins AT2G36910 38.368 8.30e-104 356