Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02651 ATGGATGCGTGGAACGAAGATTTTTCGGAGTTGGAGATTGGGAGCTCCGCGGAATCGTTCCAGAAGTTTTTGGTTTCGCAGAGAGAGCTCTTCCACAGCCAGATCGATCAGTTTCAAGAAATCGTCGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGTGCGCTCTCAACCTTTGCATATATCTCTCTCTGTTTTTCGTTTAGCTTTGTTCATAACCCCATTATTTCTGCTAATGGAAAAAGTGAAGAGACTCTTAGTTGGGTTTCGATTCAAGAAGATTTATGCTGCTGTACTTGCAATCACTTTAAGCAATTTTGTAGATTTGACTGCAGCTGGTGCTTTGTCAATAAAAATTGGGAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCCGTCTTTTCCATTAAAGATGCTATTAGCAAGAAAGAATTGCGCGAGATCAGTGCTTTATTTGGCGTCACAGTGACGCAGGTGCGTGACTTTTTCAATAGTCAACGTTCAAGAGTGAGGAGACTAGTGCAGTTGTCAAAGGAGAGGGCTTTAAGTTCTAATTCTTGTGAAGAATCTCATGATGATAAAATAAATTCTGATACTTTGAGACCAATAAATCCAGCTCCCTTAAACTCTGCTATCCCATCCAATGCTGAAGAAGCCTCTTGTTCAACACAGGAAGTGGCTTTGTCTGACCTTGATGACTCAGATAAACAATTTGTTGATAATATTTTTAGTTTAATGCAAAAAGAGGAGACATTTTCGGGGCAAGAGAAATTGATGGAGTGGATATTGACCATACATAATTTTTCAGTATTGTTGTGGTTTTTGAGCAAAGGGGGTGGAATGACTTTAGCAACATGGCTGAGTAAGGCAGCTGTTGAAGAGCAAACAAGTGTCCTTCTTCTTGTCTTGAAGGTGCTTTGTCATTTGCCTTTACATAAAGCTGTTCCCATGCACATATCAACTATATTGCAGAGTGTAAATAAACTGCGGTTCTACCGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTGTCAAAGTGGAGCAAATTATTAGCAAGGAACCAAGTAATAAAGAAGCCCAATGGTGTCAAGATTAGTGATGGTCATAAAGAGATGATGCTTTCTCAGAGGCATGCTTGCATTTTCTCTCTTTTCCGTGCACAATATGTTGGAACCTCCATTCTCAATTATTATGATTTCTATTTTTGCAGCATTGGTCAATTTATGGGCTCTGAGTCATGGCATTCAAATATTGATGTTCCTGAAGACATTCTCGCTCTTTCAGGCGAATGTTCAGATATTTTCAGGAAAACTGGATCTCCACAAGGTGCGAAATTGTTGCCTCCCAGCTTGGATGATTCCAATAAAAAGTCCACTCTCGGTGTATCTTCATCTCAATCTAGAGAACGCAGAAAAGTGCAACTAGTGGAGCAGCCAGGCCAAAAGTCAGTGAGCAGAAGCTCACAAGTGACGAGAGCAGCCCATATAAGTCAAGGCCGCCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGTGCTTTATTTATGCAGAGTAAGTATGGGAAATCTGGTTCAAAAGAAAGTAAAGAAACAAAGATTGATAGTCTGAACAAACAACCTCAGACAAACCTCACCAGTATTGCAGCTTGCACTTCTAAAGTTCCTACTTCAGCCAAAATTGAAGAAAACAAGAAACCTCTTTTACCTGCCTCTAAAACCACTAATATGCTGGAAGCTTCTTATTCAAAACCGAAATTGGATGTGAAGGAAACTCTATGGGAGAAGTGCAAGAGGATTCAGATCCCATGGAAAACACCAGCAGAAGTGGAACTTAAAGATATCTGGAGAGTTGGTGGCGGTGAAAATAGCAAAGAAGTTGATGTCCAGAGAAACAGAAGCTGCAGGGAAAAGGAAACTATATACAAAACTGTCCAAGAGATTCCACCTAACCCCAAGGAGCCTTGGGACCTTGAAATGGATTATGATGACACTTTGACGTTGGAAATTCCTATTGAACAGCTACCAGATGGTGATGGTGCAGATATAGCAGTTTCCCACGATACCTTTGCAACTCATACTGTCCAAGGGGTGGCCTCCACATCTTCAACCAGTATGGCTACTGCTGAGCCTGATTTAGAATTGCTTGCTGTACTGCTAAAAAATCCAGAGTTGGTATTTGCCCTAACTTCTGGACAAGGTGGTAGTATACCGAGTGAAGAAACCGTGAAGCTGCTTGATATGATCAAGAGAGGAGGTGTGAACTTGGGTTTAAGTGAAAATATAAATGGCAACTATGGCACGAGTGTAAAAACCTCGGAGAAGGTGGAAGTTTCTCTCCCATCTCCAACCCCTTTAAGTGATCCAAGAACGGTGCGTGATTCGAGTTCATACTACCAACTATTTGTCAAAGATATTAACGTCATGCCTGCTGTCTCCTATTACAGTGCCATGCACACCCTCTTTAGCCATGTTGGCTTATCACACGTGTTAATAGTGAAGAGCGAATAA 2544 0.4135 MDAWNEDFSELEIGSSAESFQKFLVSQRELFHSQIDQFQEIVVTQCKLTGVNPLSQEMVRSQPLHISLSVFRLALFITPLFLLMEKVKRLLVGFRFKKIYAAVLAITLSNFVDLTAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKELREISALFGVTVTQVRDFFNSQRSRVRRLVQLSKERALSSNSCEESHDDKINSDTLRPINPAPLNSAIPSNAEEASCSTQEVALSDLDDSDKQFVDNIFSLMQKEETFSGQEKLMEWILTIHNFSVLLWFLSKGGGMTLATWLSKAAVEEQTSVLLLVLKVLCHLPLHKAVPMHISTILQSVNKLRFYRTSDISNRARVLLSKWSKLLARNQVIKKPNGVKISDGHKEMMLSQRHACIFSLFRAQYVGTSILNYYDFYFCSIGQFMGSESWHSNIDVPEDILALSGECSDIFRKTGSPQGAKLLPPSLDDSNKKSTLGVSSSQSRERRKVQLVEQPGQKSVSRSSQVTRAAHISQGRPMSADDIQKAKMRALFMQSKYGKSGSKESKETKIDSLNKQPQTNLTSIAACTSKVPTSAKIEENKKPLLPASKTTNMLEASYSKPKLDVKETLWEKCKRIQIPWKTPAEVELKDIWRVGGGENSKEVDVQRNRSCREKETIYKTVQEIPPNPKEPWDLEMDYDDTLTLEIPIEQLPDGDGADIAVSHDTFATHTVQGVASTSSTSMATAEPDLELLAVLLKNPELVFALTSGQGGSIPSEETVKLLDMIKRGGVNLGLSENINGNYGTSVKTSEKVEVSLPSPTPLSDPRTVRDSSSYYQLFVKDINVMPAVSYYSAMHTLFSHVGLSHVLIVKSE 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02651 847 SMART HOX_1 125 187 IPR001356 GO:0003677
Pste5g02651 847 MobiDBLite consensus disorder prediction 451 515 - -
Pste5g02651 847 MobiDBLite consensus disorder prediction 194 208 - -
Pste5g02651 847 MobiDBLite consensus disorder prediction 489 507 - -
Pste5g02651 847 Gene3D - 123 184 - -
Pste5g02651 847 MobiDBLite consensus disorder prediction 194 225 - -
Pste5g02651 847 ProSiteProfiles 'Homeobox' domain profile. 123 183 IPR001356 GO:0003677
Pste5g02651 847 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 163 807 - -
Pste5g02651 847 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 284 366 IPR035441 -
Pste5g02651 847 MobiDBLite consensus disorder prediction 463 480 - -
Pste5g02651 847 SUPERFAMILY Homeodomain-like 125 187 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02651 566 800 Homeobox Transcription Factor Family AT4G02560 46.862 4.11e-46 176