Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02640 ATGTTGGTGAAGGTGGAGAAGAATGCTGAAAAAACTCGGGGGCATCAGATCCTGTTGATTGCTTCAGCTGACAGTTTAGAAGGTCTGCCTTCAACTATCAGACGCTGTTTTAGCCATGAAATAAGCATGGGAACTTTGACTGAAGAGCAAAGGGCTGAAATGCTATATCAATCACTGCAAAGTGTTTCTGAACTTCTCTCTAATACTGATTCAGAAGCTTTAGTAAAAGAAATAGTTGGACAGACTTCTGGTTACATGCCCAGGGATATTTGTGCTTTAATTGCTGATGCCGGTGCCAATTTATTTCCCAGAAACAATGCTAAAGTAGACAAAGATGTGTCTGATGATGTAGATAGTTCTTTTAGTTCCAAGATGATAGAGGACAACAATAACAGGAAAGTTTTACCTCAGATTCCTGGGAAAGAAGACTTGATGAATGCTTTGGAACGATCAAAGAAAAGAAATGCATCAGCCTTGGGTACTCCAAAGTTACCTCTCCTGCATAAAGATCTGTTTTCATCTGGATTACGTAAGAGATCTGGTGTTCTTTTGTATGGTCCTCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTCGCTACAGAATGTTCCTTAAACTTTCTTAGTGTGAAGGGTCCTGAACTAATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGATATTTTCCAGAAGGCTAGATCAGCACGTCCGTGTGTCATCTTCTTTGATGAACTTGATTCTCTTGCACCAGCTCGGGGTGCTTCAGGAGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATTGATGGCTTAAGTGATTCAACACAGGATCTGTTTATTATAGGGGCAAGTAATAGACTGGATTTGATAGACCCAGCACTTTTGCGCCCTGGTCGATTTGATAAACTGTTATATGTTGGAGTCAACTCTGATGCATCTTACAGGGAGCGGGTTCTGAAAGCTCTTACCCGAAAGTTCAAATTGCATGAAGATGTCTCACTTTACTCCATAGCAAAAAAATGTCCCCCAAACTTCACTGGTGCAGACATGTATGCTTTGTGTGCAGATGCTTGGTTTCATGCAGCAAAGCGCAAAGTTTTGAGTGCAAATCCGGAGTCTTCCAGCCAAGATAATGAAGCAGATTCTGTTTTTGTTGAATACAATGATTTTGTCCAGGTCTTAGAAGATCTATCGCCTTCTCTCTCAATGGCTGAGCTTAAGAAGTACGAGCAACTGAGAGATCAGTTTGAAGGCACCTCTAAGTGAATTTTGTTACTATTTTAGGGACTACGATACAAATATGCAGTAGAGATATGCACCACTGTATATTAGCCATTAGGCTCCCAACCACGGACCAGGGACGGCCCACATCTAGCTAAGTGAGCAACTTTCCGTACCCCAGTATCCTAACCAACCTCTTAAAAACATAATGATATACACCATATTTTGAGTTAAAATAAAATTTAATTACAATTTAC 1499 0.4089 MLVKVEKNAEKTRGHQILLIASADSLEGLPSTIRRCFSHEISMGTLTEEQRAEMLYQSLQSVSELLSNTDSEALVKEIVGQTSGYMPRDICALIADAGANLFPRNNAKVDKDVSDDVDSSFSSKMIEDNNNRKVLPQIPGKEDLMNALERSKKRNASALGTPKLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRLDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVLSANPESSSQDNEADSVFVEYNDFVQVLEDLSPSLSMAELKKYEQLRDQFEGTSK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02640 428 Gene3D - 163 417 IPR027417 -
Pste5g02640 428 PANTHER AAA-FAMILY ATPASE 15 425 - -
Pste5g02640 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 129 IPR027417 -
Pste5g02640 428 ProSitePatterns AAA-protein family signature. 285 303 IPR003960 GO:0005524|GO:0016887
Pste5g02640 428 Gene3D - 47 106 - -
Pste5g02640 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 422 IPR027417 -
Pste5g02640 428 Gene3D - 316 402 - -
Pste5g02640 428 Pfam ATPase family associated with various cellular activities (AAA) 182 314 IPR003959 GO:0005524|GO:0016887
Pste5g02640 428 Gene3D - 12 46 IPR027417 -
Pste5g02640 428 SMART AAA_5 178 318 IPR003593 GO:0016887
Pste5g02640 428 FunFam Peroxisomal biogenesis factor 6 142 329 - -
Pste5g02640 428 FunFam Peroxisome biogenesis protein 6 316 402 - -
Pste5g02640 428 CDD RecA-like_PEX6_r2 159 313 IPR047533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02640 Pste-Chr5 18638629 18642985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02640 175 373 Calmodulin-binding Proteins AT3G56690 41.500 2.26e-41 155