Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02637 GCAGAGAGAGAGAGAGTAGAGAGTAGAGAGAGAGAGAGGGGGAAGATGGTGTCTCTGAAACTACAGAAGCGGCTGGCGGCAAGCGTACTCAAGTGCGGCAAAGGAAAGGTTTGGTTGGACCCCAATGAAGTCAACGAAATCTCCATGGCCAATTCTCGGCAAAACATCAGGAAGTTTGTTAAGGATGGGTTTATCATCAGGAAACCAACCAAGATTCACTCCCGCTCTCGGGCCCGTAGGATGAAGGAGGCCAAGAGGAAGGGCCGTCACTCTGGATATGGGTACAAGGGAGGCAAGGCTTCCCACCAAGATTCTTTGGATGAGAAGGATGCGTGTGCTCAGACGGAATCAAAGAAAATTGACAAACACATGTACCATGATATGTACATGAAGGTGAAAGGTAATGTTTTCAAGAACAAAAGAGTCTTGATGGAGAGCATTCACAAGTCCAAGGCTGAGAAGGCAAGAGAGAAGACTTTGTCCGATCAATTTGAGGCGAAACGTGCAAAGAACAAGGCTAGCAGGGAAAGGAAGCTTGCAAGGAGGGAGGAGCGCTTAGCCCAAGGTCCTGTTGATAAGCCATCTACAGCACCCAGTGCCCCAGCTGCCACAGCACCCCAATCTGCCCAAGCGCCAAAGAAATCCAAGAAGTCAGTACTGAGTAGCCAACCCTGAAATACAAAGGATTTGACTCTTCAAAAGCGCTGGCAAAATCTTTAGTCTGTTAAAGTAGTCATGACGAATCCCTTTTTATTGGTTTAGACTTTGTAAGTTTTGCCTGTATAAGAACTTTATATCTTTCATACTTTTAAGTTACATATTTTGTTGGTGTTTTTTTGTCAGTTGTGGAAATGCACGTGTTATCCTTTTAATCCTACCCTATATACTTTTAATTACATTTAACTTGATCTATACTCCCATCTCCTGCATTCTTTGGTTGCAAAAAAATGAGAA 954 0.4423 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKFVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGYKGGKASHQDSLDEKDACAQTESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKLARREERLAQGPVDKPSTAPSAPAATAPQSAQAPKKSKKSVLSSQP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02637 209 FunFam Ribosomal protein L19 1 56 - -
Pste5g02637 209 SMART Ribosomal_L19e_2 3 136 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste5g02637 209 Pfam Ribosomal protein L19e 4 135 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pste5g02637 209 CDD Ribosomal_L19e_E 4 157 IPR033935 GO:0003735|GO:0022625
Pste5g02637 209 MobiDBLite consensus disorder prediction 59 98 - -
Pste5g02637 209 SUPERFAMILY Ribosomal protein L19 (L19e) 3 134 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pste5g02637 209 PANTHER 60S RIBOSOMAL PROTEIN L19 1 85 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pste5g02637 209 Coils Coil 151 171 - -
Pste5g02637 209 MobiDBLite consensus disorder prediction 185 209 - -
Pste5g02637 209 MobiDBLite consensus disorder prediction 59 78 - -
Pste5g02637 209 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Pste5g02637 209 MobiDBLite consensus disorder prediction 134 209 - -
Pste5g02637 209 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Pste5g02637 209 Gene3D - 57 95 - -
Pste5g02637 209 Gene3D - 97 177 - -
Pste5g02637 209 MobiDBLite consensus disorder prediction 134 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02637 Pste-Chr5 18624400 18626221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02637 1 202 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 71.028 1.64e-99 285