Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02633 AAACCACATTCCAATTATAGTCTCTTAGGATTTCGTAGTTTGAACTTTCCACCCCGTTCACCAATAGGATCACGCCACGTCATCGAAATCCACGTGGCGCGGGCAGAAGCGCACCCTATAAAAGCCCTCTCCAACCAAAAGAGCGGAGCCGAAGCGTGCCCCGAGTCAGTCACCCGACCGTTGGGGGGTTTGGTTGTCTCGCCGGTCGGGGGGTCAGTCATTGTCTCCGCCATGTACGGCAGCGACAGCGACGGTGGCAGCGACGGCGAAACGCTGGACTTCCGGAACCTGAAGGTGGTGTCCGCCGTGGGGCGCGGCGCTAAGGGCGTGGTGTTCCTGGCTCGGCCGGTCGGGGCGACGCGCGGGGAGTGGGTGGCGCTGAAGGTGGTGTCGAAGGCGCTGCTGAGAAAGAAGAACAGGAACAGCGACGGCGCGTGCAAGAGGGTCTCCTTTGAGAGGCACATACTGCGTCGTTTTGATCACCCGCTTTTGCCCAAGTTCCGTGGCGCTTTCGAGACGGAAGAGCTCACCGGTTTCGCTATCGATTTCTGCCACGGTGGGAATCTGCATTCTCTTCGGAAGAAGCAACCAGACAAAACGTTCTCTGAAGAAACCATAAGGTTTTACGCAGTGGAATTGGTGCTGGTGTTGGAGTATTTGCACAAATTTGGGGTAGTGTACAGAGATTTGAAGCCGGAGAACATCATGGTACAAGAATCAGGTCACATAATGCTCGTGGATTTCGACCTCTCCAAGAAGCTGAACATCAAGTCTGGCCCGTCGAGTTGCAACTCGTCACCGGGTTCCGACTCGTCGTCGCCGGAGAAGGACCGAAGAAGGCGACGGTTATCGCGGTTCAGCTGTTACTGTCACTCGGGGATGGCGCGGTACGACTCGGACTTTCCGAGTCAACTCGACTCACTCCCGGCGCGTCGGAGCGTGTCGGACTCGGTGGAAAAATCCAACTCGTTCGTGGGAACCGAGGATTACGTGGCGCCCGAGGTCATATCCGGCATGGGACACAACTTCGGAGTTGACTGGTGGTCGTTGGGCATCGTTTTGTACGAGATGTTCTTCGGAACGACGCCGTTTAAGGGTGCCAATAGGAAAGAAACGTTTCATCGTATTATCACCATGGAGCCTGATTTGAATGGTGAAACGCCGTTCAGGGACTTGCTTACGAGGTTGCTTGAGAAAGATCCTGGCCGTAGGATCGAGGTGGATGACATTAAGGGCCACGATTTCTTCCGAGGCGTGCAGTGGGACACGGTCTTGGAAATCGCGCGTCCACCGCATATTCCTCAGAATGAAATCGTGGATTCGGGAGGGTTTTCTAGGACAGACGTGGAGTCGTTTGTTCATGGGATATTTTTTCCCAAGAGTAAAAGCGAAGGGAATAAAACCAATGAAGAGGAGAAAATGAAGAACGAAAATACCAATAATAATAATAATAACAACAATCAAAATGTGTGGGTCGATAAGTTGAATCAAAATTCGGCTAAGGATGAAAATTTTTTAGTTTTT 1524 0.5269 KPHSNYSLLGFRSLNFPPRSPIGSRHVIEIHVARAEAHPIKALSNQKSGAEACPESVTRPLGGLVVSPVGGSVIVSAMYGSDSDGGSDGETLDFRNLKVVSAVGRGAKGVVFLARPVGATRGEWVALKVVSKALLRKKNRNSDGACKRVSFERHILRRFDHPLLPKFRGAFETEELTGFAIDFCHGGNLHSLRKKQPDKTFSEETIRFYAVELVLVLEYLHKFGVVYRDLKPENIMVQESGHIMLVDFDLSKKLNIKSGPSSCNSSPGSDSSSPEKDRRRRRLSRFSCYCHSGMARYDSDFPSQLDSLPARRSVSDSVEKSNSFVGTEDYVAPEVISGMGHNFGVDWWSLGIVLYEMFFGTTPFKGANRKETFHRIITMEPDLNGETPFRDLLTRLLEKDPGRRIEVDDIKGHDFFRGVQWDTVLEIARPPHIPQNEIVDSGGFSRTDVESFVHGIFFPKSKSEGNKTNEEEKMKNENTNNNNNNNNQNVWVDKLNQNSAKDENFLVF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02633 508 SMART serkin_6 97 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02633 508 Gene3D Phosphorylase Kinase; domain 1 97 187 - -
Pste5g02633 508 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 508 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste5g02633 508 PANTHER FLIPPASE KINASE 1-RELATED 91 441 - -
Pste5g02633 508 MobiDBLite consensus disorder prediction 460 489 - -
Pste5g02633 508 Pfam Protein kinase domain 99 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02633 508 Pfam Protein kinase domain 319 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02633 508 Gene3D Transferase(Phosphotransferase) domain 1 319 435 - -
Pste5g02633 508 Gene3D Transferase(Phosphotransferase) domain 1 188 257 - -
Pste5g02633 508 MobiDBLite consensus disorder prediction 259 280 - -
Pste5g02633 508 SUPERFAMILY Protein kinase-like (PK-like) 96 443 IPR011009 -
Pste5g02633 508 Coils Coil 467 489 - -
Pste5g02633 508 ProSiteProfiles Protein kinase domain profile. 97 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02633 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Pste5g02633 508 FunFam Serine/threonine-protein kinase OXI1 319 435 - -
Pste5g02633 508 FunFam Serine/threonine-protein kinase OXI1 188 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02633 Pste-Chr5 18599398 18602983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02633 91 508 AGC Kinase Gene Family AT3G25250 50.580 2.50e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste5g02633 Pkinase 1.3e-30 CL0016