Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02602 CGCAACACGATTTGTTCCTGTGACAAACACCACCACTCACTCACTCTTTTCTTCTAATAACTGCGACCCAACGGAGACCGTTTGTTTCGTTTTCTTTATCGGGTGGAATCCGCAATCTGCCACAAACCCTCTCCACCGATTCTCTTCCCATCAAACTCGGAACTCAATTCCTTCAAACCGAGTTAGGGTTTTGATTCTCTGAGTCCGATTCACAGTTCCGGCTCCTGCACCTTCAATAAGTTTTTGTGTTTAGCTTTTGATTTCGGTTTCAGTTTCATTTGGAACTAACGCAAAAGATGTATGCTGATCGGGTGGAGAGTGGAACTCGGAGATCGGTGAAGGAACGCCTTGATGGGAACTTTCCCACTGATTCTACTCGCCAACACAAAATCACCGGAAAGAGGCAGAGGGATGATGACAAATGGAAACATGATCTCTATGAGGATGAACAACCCCGGCTCTCTAGTATGGATTGATTATGTTATTCTCATATGCAAGTATAAGTTGCTGCTCTTGTTGGATGCCGATAGTTCATTTTATGGGTTTTGACTGTGTGTTAATGGCTTATGAAGATCGCAAGGTCACTTCTCAAGATCTCCGTTTGAAGCTTCAAAAGAAAGGTCTTCACCCTGGAGGTCAAACTGGAAAGAGTTCTGTTCCTGGTGAGCGGGATCTCCGTGAAAGGCTATCAGGGACAATGACTCCACAACCTAAAAACTATGACCCACCGAAGCCTAAAATGCCTGCTAAACCTAGCAGTAAAAGTATCGATGTTGAGCCTCCTGCAGTTCATATCAAAAGAACAGCAAACCCAACTACTAAAAAGTCCCGAAAGGCTGATACTTCACTTGAAGAATTTTTGCTGTCCGTGGGTCTCGAAAAGTATCTTATAAGTTTTCAGGCCGAAGAAGTTGATATGGCTGCACTCAATCATATGACTGATGAGGATCTCAAGGCCATGGGTATACCAATGGGACCCAGAAAGAAGATACTTTTAGCCTTAGAATCGAAAGGCTTGCCTATTGAACTAGTAGAGAAAGTTGTAATAGTACCTGAACAACCAACACCACGCAAGAGAATGTTCTTGTCAAATATTGACCTGTCCCTTGTTGTTTACCAAGACTCTGCCTCCTTTTTTGATCCTCCAAGCACCCAAATGAGCTTTAATGAGATTTGTGGCAAATTATATAATGCAATTAGCAAAATGCTTGTGCACTATGACTTTATGGCTGGCAGGCTAGTGCCAAGTTTGGAGGAGACTCATCGATTTGAAATAGATTGTAATGGTGCTGGCTTGGTTGTTGCAGCTGCAAGGACTGACAGAAAGTTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCAGAGTTGAGGGAATTGGTTGTTTTCTTGCATGAAGGGGTTGATCAAGAAACTGAGCTGAAAGACAAGCCCCTTGCATCCTTACAGCTGACTCAATTTGGTTGTGGAAGTTTAGCACTTGCTTCTCGCTACAACCACTGCACACTGGACGGTTTTGCAGTCAGAGATTTTGAGGTAAATTTAGGTGCATTAACACGCGGTGATGACCTCATCATAGTGCCTAATGCAGACAGAACACTGCTAAGAGCTCGAAACCCTCCAAAGATAACTCATCCACATTTTGAGTATTCAAAATCCACTGAGACACACAACTTGTTTACTCTCCGGGGAAAAAGTGGCACCAATGTCACACAATCATTGCCAGGAAACCAAATCCACGTGCTTCATTTGTCACCACAAAAAATAGCCAGCTTAAAAAAGAAAGCCATGAATGACAATTCCTTAAAGAACACCACAACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGAAGCATTGCAATAAAGATCCCAGATGAAAAAGTGTCCACAATGCTGTTTCCAGTGGATGTTAGGAAAAGGGTAGTTCCTGAACTCCCAGATGGATTTACTGGCAATGCATTGGTGCCTGGTTTTGCAAGAGCAACAGTGAAAGAGCTGAAGGAGCTAGAGGATGCTTGTCACATAAGGAAGGTTCAAGAAGGTGTTGAAAGGTTGGATGATGAGTACATTAAGTCAGGTTTGGATTGGTTAGAGGTGAATAAAGGGGCACCTTGTATAGAAGATAGTTTCTCCTTGGTGTCATGGTGGAGACTGGGGCTAGAGGAGAAACTTTTTGCATGGGGAAGACTTATGTGTGCTACCCCACTTACAGTTAAGCCTGGTTTGGTTATGCTTTTGCCAGGGCCACACGATCAAGGGGGTCTTAACATATGCCTGGATTTACCTCAGGATCAAATGGAAGAGTTTAGTAGGATAATGCTAGAAGTTTAA 2335 0.4317 MLFSYASISCCSCWMPIVHFMGFDCVLMAYEDRKVTSQDLRLKLQKKGLHPGGQTGKSSVPGERDLRERLSGTMTPQPKNYDPPKPKMPAKPSSKSIDVEPPAVHIKRTANPTTKKSRKADTSLEEFLLSVGLEKYLISFQAEEVDMAALNHMTDEDLKAMGIPMGPRKKILLALESKGLPIELVEKVVIVPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPSTQMSFNEICGKLYNAISKMLVHYDFMAGRLVPSLEETHRFEIDCNGAGLVVAAARTDRKLSEFGVISAPNPELRELVVFLHEGVDQETELKDKPLASLQLTQFGCGSLALASRYNHCTLDGFAVRDFEVNLGALTRGDDLIIVPNADRTLLRARNPPKITHPHFEYSKSTETHNLFTLRGKSGTNVTQSLPGNQIHVLHLSPQKIASLKKKAMNDNSLKNTTTFQVVAAKIWKARSIAIKIPDEKVSTMLFPVDVRKRVVPELPDGFTGNALVPGFARATVKELKELEDACHIRKVQEGVERLDDEYIKSGLDWLEVNKGAPCIEDSFSLVSWWRLGLEEKLFAWGRLMCATPLTVKPGLVMLLPGPHDQGGLNICLDLPQDQMEEFSRIMLEV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02602 618 SMART SAM_4 116 181 IPR001660 GO:0005515
Pste5g02602 618 ProSiteProfiles SAM domain profile. 119 173 IPR001660 GO:0005515
Pste5g02602 618 MobiDBLite consensus disorder prediction 45 64 - -
Pste5g02602 618 Pfam SAM domain (Sterile alpha motif) 121 176 IPR001660 GO:0005515
Pste5g02602 618 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 190 608 - -
Pste5g02602 618 MobiDBLite consensus disorder prediction 69 98 - -
Pste5g02602 618 SUPERFAMILY SAM/Pointed domain 122 176 IPR013761 -
Pste5g02602 618 Gene3D - 121 179 IPR013761 -
Pste5g02602 618 Gene3D - 410 618 IPR023213 -
Pste5g02602 618 Gene3D - 180 392 IPR023213 -
Pste5g02602 618 Pfam Transferase family 181 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02602 Pste-Chr5 18329766 18339615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02602 182 618 Monolignol Biosynthesis Gene Families AT5G48930 28.859 4.32e-57 197