Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02581 ACAAAGTCGTTTACACATGAAGACTTGTCAATTTCAAGTTCAAATTTAAGCTCCATTGGTTCTGAATCCCTGGGATGGCCCGCTTCTGAATCTAGAAGTGAAAATGATGCTCCTTTTGGCCAAGCTGGCAGTTGTAGTAGATACAAGCTTTTTGGAGTTAACTTAATTGATCGTAAAGCGGAGCTCCCTTCACAACAATTGAGTTCTTTCAATAAGACTTCGAGTCTCATTTCTAGCCCTCCAATGTGTGTTACCTCGGCGAAAACATGCAAGAAGTGTCGCTCTGTCAATATTCGGAGCTGTACAAAGGTGCTTAAGGTGGGAACTGCTCTTGGAAGAGCAGTTGACCTCACCCGTTTTCGTGGATATGATGAGCTCATTACTGAACTCGACTCAATGTTTGATTTTGGAGGAACTTTAATCAATGGAAGCAGTGGATGGCATGTGACCTGCATAGATGACGATGGAGACATGATGCCCTTAGGGGATTATCCGTGGCAGTTAAGTAGTGAAACTAATCGTATCTTA 528 0.428 TKSFTHEDLSISSSNLSSIGSESLGWPASESRSENDAPFGQAGSCSRYKLFGVNLIDRKAELPSQQLSSFNKTSSLISSPPMCVTSAKTCKKCRSVNIRSCTKVLKVGTALGRAVDLTRFRGYDELITELDSMFDFGGTLINGSSGWHVTCIDDDGDMMPLGDYPWQLSSETNRIL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02581 176 SUPERFAMILY CAD & PB1 domains 104 172 - -
Pste5g02581 176 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 32 168 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste5g02581 176 Pfam AUX/IAA family 96 172 IPR033389 -
Pste5g02581 176 ProSiteProfiles PB1 domain profile. 99 176 IPR000270 GO:0005515
Pste5g02581 176 Gene3D - 94 176 - -
Pste5g02581 176 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02581 Pste-Chr5 18201539 18202673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02581 99 167 B3 DNA Binding Superfamily AT5G62000 52.174 6.94e-21 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pste5g02581 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02581 5 18201539 18202673 Pste5g02581 5 18201539 18202673 ECH