Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02579 CAGAGCTCTTTCTGGGAGCTTGAAATAGTCAACTGCAACACCCTCCGTGTATTTGTCTGCATCTCAGCTACTTTTCGGCAGAAAATCATGTTAAGATTGGGTTTCAGGTTGCTTACTTGGTTTCTGGTAATTGTTAGAAACAGTTGCAACATTTCCTTTTCAAGGGCTCTGTTTACTGAGAGCTTCCACAGGTTATTGTCTACTCAGACTCGAGGGAAGCTAGAAGACAAGGTTGCACTGATCACGGGCGCAGCTAGTGGAATAGGAAAGGCCACAGCTACCAAATTCATCAATAATGGAGCGAAGGTTATTATTGCCGATATTCATCAACAGCTTGGTGAAGAGACTGCGAAAGAACTAGGACCTAATGCTACTTTCATTACATGTGATGTCACTCAAGAGTCAGATGTTTCCAATGCTGTTGATTTTGCCATTTCTAAATACAAACAACTTGATATCATGTACAACAATGCAGGGATAGCCTGCAGAAGTCCTCTAAGCATTGTTGACCTGGACTTGGCATTGTTTGACAAAGTCATGGACATAAATGTTCGTGGGGTTGTGGCAGGCATCAAACATGCTGCACGTGTGATGATCCCACGTGGAACTGGGTCCATTCTCTGCACAGCAAGTATCACAGGTGTGATGGGAGGGGTTGCCCAGCACACTTACTCAATATCCAAGTTTGCAGTTATAGGCATTGTTAAATCTCTGGCTTCAGAGCTATGTAGGCATGGAATCCGAGTCAATTGCATATCACCTTTTGCTATCCCCACTCCTTTTGTATTGGGAGAAATGAGTCAGATGTATCCTCATGTTGATGCTCAGAAACATGTGGAAATTGTTCACAATGTTGGTGTCCTAAAGGGAGTGAATTGTGAATCCAATGATATTGCTAATGCTGCACTTTTTCTTGCGTCCGATAATGCCAAGTATATTAGTGGACTCAACTTGGTTGTGGATGGAGGTTTCACATCTTTTAAGAATTTGGACTTTCTTGCACCTGATAAAGTGCAGTAGAAGTTTTTACAATGTATATAAAGGTAACCATGATCGATGAAAACCATCTTCTGTTGAAATTAATTGTGGATTAATATCACTCAATATCTATTATCATTAACCG 1123 0.4132 QSSFWELEIVNCNTLRVFVCISATFRQKIMLRLGFRLLTWFLVIVRNSCNISFSRALFTESFHRLLSTQTRGKLEDKVALITGAASGIGKATATKFINNGAKVIIADIHQQLGEETAKELGPNATFITCDVTQESDVSNAVDFAISKYKQLDIMYNNAGIACRSPLSIVDLDLALFDKVMDINVRGVVAGIKHAARVMIPRGTGSILCTASITGVMGGVAQHTYSISKFAVIGIVKSLASELCRHGIRVNCISPFAIPTPFVLGEMSQMYPHVDAQKHVEIVHNVGVLKGVNCESNDIANAALFLASDNAKYISGLNLVVDGGFTSFKNLDFLAPDKVQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02579 339 FunFam Short-chain dehydrogenase reductase 65 329 - -
Pste5g02579 339 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Pste5g02579 339 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 212 IPR002347 -
Pste5g02579 339 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 160 IPR002347 -
Pste5g02579 339 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 71 328 - -
Pste5g02579 339 Pfam Enoyl-(Acyl carrier protein) reductase 83 325 - -
Pste5g02579 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 75 325 IPR036291 -
Pste5g02579 339 Gene3D - 64 332 - -
Pste5g02579 339 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 211 239 IPR020904 GO:0016491
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 78 95 IPR002347 -
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 198 214 IPR002347 -
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 149 160 IPR002347 -
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 288 308 IPR002347 -
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Pste5g02579 339 PRINTS Glucose/ribitol dehydrogenase family signature 245 262 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02579 Pste-Chr5 18190495 18192859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02579 28 324 Acyl Lipid Metabolism Gene Families AT1G24360 29.154 7.13e-25 100