Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02553 GCGATTGGAGGTAGTGAAGGGGTTCCCTCCACAGGTAAATTCAGACAAAAAAAATCTGAAAAAGAAAAGGAAAAAGGCATTGTTGGACACCGTGCAAATCAAGCATTTTCTGGCTTGTTATTTCACGCGCCCTCTCTTCATTTGTACCTCCTCTTCCTCACTCACTACAACGGCGCCGGAGATTCGTCGCTCTCCTTCTCCACCGCCGCGATGGGCACCAATTCCGTGCTCTCCGACTCTTCTCACTCTCACGATCTTGACGACCAGATCTCCCAGCTCATGCAGTGCAAGCCACTTTCCGAGCAACAGGTCAGAGTTTTATGTGAGAAGGCTAAGGAGATTTTAATGGATGAAAGTAATGTTCAGCCTGTTAAAAGCCCTGTGACAATTTGTGGCGATATTCATGGGCAGTTTCATGATCTTGCTGAACTGTTTCGAATTGGAGGGAAGTGTCCAGACACTAACTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAAACTGTAACACTCCTTGTGGCACTGAAAGTGCGGTATCCTCAGCGGATTACTATTCTTAGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTATATGGATTTTATGATGAATGCCTTAGAAAGTATGGTAATGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGATTTTTTTCCATTGACTGCTTTGGTGGAATCAGAAATATTCTGCTTGCATGGTGGTCTATCACCTTCAATCGAGACCCTTGATAACATAAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGCCCCATGTGTGATCTATTGTGGTCTGACCCAGATGACAGATGTGGCTGGGGAATTTCCCCTCGTGGTGCTGGATATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACAGCCTCAAGTTGATTGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTACTGTTACCGATGTGGGAACATGGCTTCCATATTGGAGGTTGATGATTGCAAGGGCCATACATTTATCCAGTTTGAACCTGCTCCCAGGAGAGGAGAACCAGATGTCACTCGCAGAACGCCTGATTACTTCTTATAATGTAGCTGTTGAATGTCATACCGTATATCATGGTTACCTCTACTGCACTAATTTCAGGTAGTTGTGCATCCTCATCATGAGATTCCTTTAAGCATTTAAATCCATGGATCTACACGTTCCGTGCGTTTGGGGGTTGTTCAAAGATTGCTTTGATGTATAATAGGCAGGTAACATTCCACTGATCTGTTACACCCGAGAACTTGCTGGACACCTTGTCTGGAGAAGTCACCAAGATGATGTCAGAATACATATTGTTCCAGCAAAATGTGGATATTTTTTCCCCCTTTTTATTATTTTTTTTTTTGCTCGTGTTCAGTACCTCCTTCTTTTATGGCTTTACAAGCTAATATGACTGGATTTTTGTCTCATGGATGTTTTTATTAAGTTCTATCACTTTTCAGTTAAAGTTGCATGATAATAGTGATTCAGTTTTGTTCTTACGAACTGTGTTCTACTTATCACTTTTCATAACTCTTGTAACAATGAAAAGTTGTTAACATACGAATCATGAGTTACAATTTCAAGTTTATTCTGCTCTACTAGATCGATTTTTTCC 1714 0.4137 AIGGSEGVPSTGKFRQKKSEKEKEKGIVGHRANQAFSGLLFHAPSLHLYLLFLTHYNGAGDSSLSFSTAAMGTNSVLSDSSHSHDLDDQISQLMQCKPLSEQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02553 385 ProSitePatterns Serine/threonine specific protein phosphatases signature. 190 195 IPR006186 GO:0016787
Pste5g02553 385 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 84 385 IPR047129 GO:0004722
Pste5g02553 385 SUPERFAMILY Metallo-dependent phosphatases 74 370 IPR029052 -
Pste5g02553 385 MobiDBLite consensus disorder prediction 1 26 - -
Pste5g02553 385 SMART pp2a_7 99 369 IPR006186 GO:0016787
Pste5g02553 385 FunFam Serine/threonine-protein phosphatase 78 385 - -
Pste5g02553 385 Pfam Calcineurin-like phosphoesterase 127 318 IPR004843 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 224 250 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 253 280 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 127 154 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 309 329 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 189 213 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 331 347 IPR006186 GO:0016787
Pste5g02553 385 PRINTS Serine/threonine phosphatase family signature 156 183 IPR006186 GO:0016787
Pste5g02553 385 CDD MPP_PP2A_PP4_PP6 85 369 - -
Pste5g02553 385 Gene3D - 76 385 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02553 Pste-Chr5 17976849 17989224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02553 91 315 Calmodulin-binding Proteins AT5G63870 34.457 3.79e-32 121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02553 5 17976849 17989224 Pste5g02553 5 17976849 17989224 ECH