Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02552 GGGGTTTTAGAATTAGGGTTTTCTCTTCTGAATTCACCGCCACTGCGAGTCGACGCCATAGGCCAAACCCTCGTTTTCTCCCATTCCTAGCACACGCACGAGCTGCATCCATGTTTCTTTAGCTTGGATTCTAGTGGTTTTTCTAGCAAAGTGCTGTTCTAGTCTGAAGCACAATGAGATTGGAGAAATGTTGGTTTTGCTCTTCAACCATATACCCTGGACACGGAATCCAATTTGTTCGTAATGATGCGAAGATTTTTCGGTTTTGTAGATCGAAATGTCATAAGAACTTTAAAATGAAGAGAAATCCTCGTAAGGTGAAATGGACCAAGGCATATCGGCGAGTGCATGGAAAGGATATGACACAGGATTCAACCTTTGAGTTTGAGAGAAAGCGAAACAGGCCAGAAAGATATGACAGGAATCTTGCGGAGAATGTCCTCAAGGCCATTCCTAAGATTAATAAGATCAGATCAGCCAGGGAGGAGAGACACCACAAGAATAGGATGAAAGGCAAAAAAGAAAAGCTGCAGAAAGAGGCAATGAAGGAGTTGGAGCAAGGCATCAGTTTGGTCAAAGCTCCTTCTGTGCTTCAAGAGGACCCATCTCTCACCTTACCAAAGATCAAAGTCAAGGTTTCCCAAAAGCAGTCAGAGGAGAATCATGCCATGGAAGAGTAATTTTATCATTGCTGCACTTAATTTTTACTGTTTTAATATTTGTTGTTAGATTAGTTTCCTGCAAAGCCCAGTTTACCAATTTTGGTGGTATCATTATAGTGAATGATGCGTTTTCCAAACAAGATTTTTGGTTTAACATTTGGTGTGTTGATGATGGTTATGTGAGATGCCGAACTATATTATAAAGGAGAAATCAAAAATTTTGCTAGATTGTCCACTTG 901 0.4062 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKINKIRSAREERHHKNRMKGKKEKLQKEAMKELEQGISLVKAPSVLQEDPSLTLPKIKVKVSQKQSEENHAMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02552 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Pste5g02552 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Pste5g02552 168 SMART 4TRASH 6 44 IPR011017 -
Pste5g02552 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 167 IPR000988 -
Pste5g02552 168 Coils Coil 102 129 - -
Pste5g02552 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Pste5g02552 168 MobiDBLite consensus disorder prediction 102 124 - -
Pste5g02552 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Pste5g02552 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Pste5g02552 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02552 Pste-Chr5 17969687 17972020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02552 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 70.833 1.42e-84 244