Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02550 TTCATGGTGAGGTAAAATAAAAAATGGATGATCAAGTTCAGGTTGAAGATATTGTGACCGTTGATTCCATGGAGCACACTTTTCATGTGTAAGAACTGAACTAAGAAGGCAAGTAAGCATTTGGTGGCCCTTCCCTATAGAACTCTCTAGAACCTCTCTTTCGGAGCGGTCAGAAAGACTAAACACCGCACTCTTCTTGTTTCCGAGTCACAGCGATGGAAGAAGACTTCGATATTCCGGGCGGCGACGAAGAAATGGATCTCGGCGAACTCAAGGTCGGCGAGGAGAGGGAGATCGGGCCCGGCGGCCTCAAGAAGAAGCTTCTCAAGGAAGGTCAAGGCTGGGAAACCCCCGAAATTGGCGACGAAGTTCAAGTTCATTACACGGGGACTTTGCTCGATGGGACTAAGTTCGATTCGAGCCGCGACAGGGATTCTCCCTTCAGCTTCACGCTCGGACAAGGGCAAGTAATTAAAGGATGGGATGAAGGTATTAAAACCATGAAGAAAGGTGAAAATGCAATTTTCACCATTCCTCCTGAGCTAGCTTATGGTGAATCTGGTTCCCCTCCAACAATTCCTCCTAATGCTACACTCAAATTTGATGTTGAGCTGCTGTCTTGGACTAGTGTAAAGGACATATGCAGGGATGGCGGTATATTTAAAAAGATAGTTACTGAGGGGGATAAATGGGAGAACCCAAAGGACCCTGATGAAGTACTGGTTAAGTACGAAGCTTATCTAGAAGATGGAAAGCTTGTAGCAAAGTCTGATGGAGTGGTGTTCACAGTTAGAGAGGGTCATTTTTGTCCTGCATTTTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGGTCTTGACAGTTAAGCCACAATATGGATTTGGTGAGAAGGGGAAGCCTGCACAAGGTGATGAAGGTGCAGTTCCACCGAATGCAACATTGCAGATTACTCTTGAATTAGTTTCATGGAAAACTGTTTCAGAAGTAACTGATGACAAAAAAGTCATAAAGAAGATCCTCCAGGAAGGGGAAGGATATGAGCGGCCAAATGAGGGGGCCATTGTGAAAGTGAAACTAATTGGTAAGCTACAAGATGGTACAACCTTTTTGAAAAAGGGCCACGATGAAGAAGAGAAGTTGTTTGAATTCAAAACAGATGAGGAACAAGTTGTTGATGGACTTGATAGGGCTGTATTGACTATGAAGAAAGGTGAGGTTGCATTGTTGACCATTGCACCTGACTATGCTTTCGGTTCATCTGAGTCTCAGCAGGAGTTGGCTGTGATTCCTCCTAACTCAACTGTGTATTTTGAAGTTGAGTTAGTGTCATTTGAAAAAGAGAAGGAGTCCTGGGATCTTAACACTACAGAGAAACTTGAAGCTGCTGGTAAGAAGAAGGAAGAAGGAAATGTGTTGTTTAAAGCTGGTAAATATGCAAGAGCTTCCAAAAGATATGATAAGGGTGTGAAGTACATAGAACATGATTCCTCCTTTGCTGAGAAGGAGAAAAATCAGGCCAAGACCTTGAAGGTTGCCTGCAATCTGAACAACGCTGCTTGCAAATTGAAGTTAAAAGACTATAAAGAAGCAGAGAAATTATGTACTAAGGTGTTGGACCTTGAGGGTACAAATGTGAAAGCACTCTATAGAAGGGCCCAGGCATATATGCAGTTAGGTGACTTGGATTTGGCTGAATTTGACATTAAGAAAGCACTTGAAATTGACCCTAACAACAGGGATGTAAAATTGGAGTACAGGACTTTGAAGGAAAAGGTGAAAGAGAATAACAGAAAGGAAGCGCAATTTTATGGAAATATGATCAACAAGATGACGAAGATTGGTTCCTGATAGCAATAAACCAGCTTCTATCTATGGTACTCAATCTCTCAATACACGTTTAGAAGTTTAGTCTGAGATTTTATCTTCTTTGTATCCTTTATGCACTAAGAAAATTTTATTGCTTTCAAAAAAAGGAAAATTTGATGGATACTCATTTCATATTTATTGATACTCATTTCATTTTTATTATCTAAAGTTAACATACTTGATTATATATTTTTTTCAAGATGATTTGTAGTAGAACTCCTATGAGAAATGGAATTAAATTAGTTAAAGTTTGCT 2126 0.4069 MEEDFDIPGGDEEMDLGELKVGEEREIGPGGLKKKLLKEGQGWETPEIGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLKFDVELLSWTSVKDICRDGGIFKKIVTEGDKWENPKDPDEVLVKYEAYLEDGKLVAKSDGVVFTVREGHFCPAFSKAVKTMKKGEKVVLTVKPQYGFGEKGKPAQGDEGAVPPNATLQITLELVSWKTVSEVTDDKKVIKKILQEGEGYERPNEGAIVKVKLIGKLQDGTTFLKKGHDEEEKLFEFKTDEEQVVDGLDRAVLTMKKGEVALLTIAPDYAFGSSESQQELAVIPPNSTVYFEVELVSFEKEKESWDLNTTEKLEAAGKKKEEGNVLFKAGKYARASKRYDKGVKYIEHDSSFAEKEKNQAKTLKVACNLNNAACKLKLKDYKEAEKLCTKVLDLEGTNVKALYRRAQAYMQLGDLDLAEFDIKKALEIDPNNRDVKLEYRTLKEKVKENNRKEAQFYGNMINKMTKIGS 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02550 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 165 254 IPR001179 GO:0003755
Pste5g02550 545 PANTHER PEPTIDYLPROLYL ISOMERASE 25 137 - -
Pste5g02550 545 FunFam Peptidylprolyl isomerase 22 140 - -
Pste5g02550 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 276 372 IPR001179 GO:0003755
Pste5g02550 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 134 IPR001179 GO:0003755
Pste5g02550 545 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 160 251 IPR001179 GO:0003755
Pste5g02550 545 Gene3D - 255 376 IPR046357 GO:0003755
Pste5g02550 545 Pfam Tetratricopeptide repeat 475 508 IPR001440 GO:0005515
Pste5g02550 545 FunFam Peptidylprolyl isomerase 255 377 - -
Pste5g02550 545 FunFam Peptidylprolyl isomerase 141 254 - -
Pste5g02550 545 ProSiteProfiles TPR repeat profile. 475 508 IPR019734 GO:0005515
Pste5g02550 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Pste5g02550 545 Gene3D Tetratricopeptide repeat domain 378 535 IPR011990 GO:0005515
Pste5g02550 545 Gene3D - 22 140 IPR046357 GO:0003755
Pste5g02550 545 SUPERFAMILY FKBP-like 23 141 - -
Pste5g02550 545 SUPERFAMILY FKBP-like 141 256 - -
Pste5g02550 545 SMART tpr_5 441 474 IPR019734 GO:0005515
Pste5g02550 545 SMART tpr_5 392 425 IPR019734 GO:0005515
Pste5g02550 545 SMART tpr_5 475 508 IPR019734 GO:0005515
Pste5g02550 545 ProSiteProfiles TPR repeat region circular profile. 475 508 - -
Pste5g02550 545 SUPERFAMILY TPR-like 386 539 IPR011990 GO:0005515
Pste5g02550 545 Coils Coil 508 528 - -
Pste5g02550 545 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 282 375 IPR001179 GO:0003755
Pste5g02550 545 MobiDBLite consensus disorder prediction 1 25 - -
Pste5g02550 545 SUPERFAMILY FKBP-like 259 392 - -
Pste5g02550 545 Gene3D - 141 254 IPR046357 GO:0003755
Pste5g02550 545 FunFam Peptidylprolyl isomerase 380 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02550 Pste-Chr5 17949698 17956170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02550 19 543 Calmodulin-binding Proteins AT3G25230 80.190 0.0 858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02550 5 17949698 17956170 Pste6g00868 6 3381048 3386053 PCT