Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02549 ATGATGGCCGCAATAGCAACCTGCAACATTACACATCGTCTAGGAGCGACCGCAAGCCACTTCCCACCGCCATTTTGCAAAAGTGATGCTATTGACTATTTTGATTCCTTCCCAAGTTCAAAGGATGATAATTTATGTATGGCGTTTATGTGTTTGTGTAATTTTCTATATGATGATTTCTGTTATTGTTTTTCATCAGGTATTTCTAGGGATTCCATGCACAAGAGGCGTGCCACTGGTGGCAAGAAGAAGGCATGGAGAAAGAAGAGAAAGTATGAGCTTGGTCGCCAGCCAGCAAACACTAAGCTATCAAGCAACAAGACAGTCAGGAGGATTCGTGTTAGAGGTGGCAATGTTAAGTGGAGGGCATTGAGGTTGGATACTGGCAATTTCTCATGGGGTAGTGAAGCTGTGACTCGCAAGACCCGTCTTCTAGATGTTGTCTACAATGCCTCAAACAATGAGCTTGTGCGAACTCAGACCCTGGTCAAGAGTGCTATTGTTCAGGTTGATGCTGCCCCTTTTAAGCAGTGGTACCTTCAGCACTATGGTGTTGATCTTGGTAAAAAGAAGAAAGTAGCATCCAAGAAGGAAACTACCGAGGAGGGAGAAGCTGCTGCGGAAGAAACTAAAAAAAGTAACCATGTGCAGAGGAAAATTGAGAAGCGCCAGAAGGATCGTAAACTTGATCCCCACATTGAAGAGCAATTTGGTGGTGGCCGATTGTTGGCCTGCATTTCTTCTCGCCCTGGACAATGTGGAAGGGCTGATGGGTACATTCTGGAAGGTAAGGAACTGGAGTTTTACATGAAGAAACTCCAAAGGAAAAAGGGAAAGGGTGCTGCTTAAATTTAGTATTTTCCAAATTTCTATTTGGCTTTAGTTCTTGGAAATTGGTACAATTCAAGATGGTACTTTTTTATGACTGTTAGGGTGATCTCATAGGACATCCTTAGTGTGAACGTTTTATTAGTTTTATGCCAATTTCAACCAAATTTTGTTTTATTTGTTTATGTTACTGATAATTTAAAAAGGCAGGGATGCATGAGATTTCTACTTATAATTACGATTGCCATTATTAGATTAGACAACGAAAACTGATTCGTTATAAATTACCGATTATTC 1125 0.4098 MMAAIATCNITHRLGATASHFPPPFCKSDAIDYFDSFPSSKDDNLCMAFMCLCNFLYDDFCYCFSSGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDLGKKKKVASKKETTEEGEAAAEETKKSNHVQRKIEKRQKDRKLDPHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02549 282 FunFam 40S ribosomal protein S8 174 240 - -
Pste5g02549 282 NCBIfam ribosomal protein eS8 67 263 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pste5g02549 282 FunFam 40S ribosomal protein S8 226 279 - -
Pste5g02549 282 MobiDBLite consensus disorder prediction 191 231 - -
Pste5g02549 282 FunFam 40S ribosomal protein S8 97 225 - -
Pste5g02549 282 Pfam Ribosomal protein S8e 70 261 IPR022309 -
Pste5g02549 282 CDD Ribosomal_S8e_like 70 261 - -
Pste5g02549 282 Gene3D - 97 225 - -
Pste5g02549 282 PANTHER 40S RIBOSOMAL PROTEIN S8 67 279 IPR001047 GO:0003735|GO:0005840|GO:0006412
Pste5g02549 282 ProSitePatterns Ribosomal protein S8e signature. 76 95 IPR018283 GO:0003735|GO:0005840|GO:0006412
Pste5g02549 282 Gene3D - 226 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02549 Pste-Chr5 17925502 17930553 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02549 67 270 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 84.390 3.16e-124 351