Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste5g02544 | GTTTACCCAATAGCACAAATGGTACGAACCAAACCCTAGACACAAGTTTTTGGTCAGTGTCCACTTGAATCCGTTTCTGCTGCTGCTTTGTTTCTCCTCTTCCAGAGAACACCCCGCGAGTTGCAAAAGCTGTGCGCACAAATTCAACTCTGCTATTATTCTTGTTCTTCTTTCGCGATTGTCTCATCTGAATAATTCTCGGCGTTACTTACAACTTTTGATAACAATGGCTTCAAGATTCTGGACTCAGGTGGAAGTGACTCGGAGGAGGAGGAGAGTGATTATGACGAGGAGGTTGAAACCACCGCAGGTGAATCTGCTAATCAAGCGGTGACAAGCAGGTACTTGCAGGACAATGCAAGTGACAGTGATGATTCGGATGGGCAAAAGCGTGTTGTTCGGTCGGCGAAAGACAAGCGATTTGAGGAGATGGTGTCCACAGTTGACCAGATGAAGAATGCCATGAAGATCAATGACTGGGTGAGCTTGCAAGAGAGCTTTGACAAGATTAACAAACAGCTTGAAAAGGTCATGCGTGTCACCGAGTCTGAGAAGGTTCCAAATCTCTACATCAAGGCGCTTGTGATGCTCGAAGATTTTTTGGCTCAGGCTTTGGCTAATAAGGATGCCAAGAAGAAGATGAGCAGTAGCAATGCCAAGGCCTTGAACTCCATGAAGCAGAAGCTGAAGAAGAATAATAAACAGTACGAGGATTTGATTAATAAGTGCAGGGAGAATCCTGAGAGTGATGATGAAAAGGAAGATGAGGATAGTGAGGATGATTATGAGAATGCTGGTGATGGTCCTTGGGACCAAAAGCTAAGCAAGAAGGACCGTCTCTTGGATAGGCAGTTTATGAAAGACCCTAGTGAGATCACGTGGGACACTGTTAACAAGAAGTTCAAAGAGGTTGTGGCTGCTAGGGGCCGTAAGGGTACTGGTCGTTTTGAGCAGGTTGAGCAGCTTACTTTCTTAACGAAGGTTGCTAAGACACCTGCACAGAAGCTGGAAATCCTGTTCAGTGTGGTTTCTGCTCAGTTTGATGTTAATCCGGGGCTCAATGGGCATATGCCCATAAATGTGTGGAAAAAATGTGTGCAGAACATGCTGGTCATCCTTGATATTCTAGTGCAGCATCCAAACATAGTGGTTGATGATTCAGTGGAACCAGATGAGAATGAAACTCAGAAAGGGATTGACTACAATGGAACCATTCGAGTTTGGGGTAACTTAGTTGCTTTCTTAGAAAGAATTGATGTTGAGTTTTTCAAGAGCTTGCAGTGCATAGATCCTCATACCCGGGACTATGTTGAGAGGCTCAAGGACGAACCTCTGTTTCTGGTTCTTGCTCAAAACGTCCAGGAATATCTTGAAAGAGTTGGAAATTTCAAAGCTGCATCTAAGGTGGCCTTGAGGAGGGTTGAGCTCATTTACTACAAACCACAAGAGGTTTATGATGCAATGAAAAAGTTGACTGAACTGACAGAGGATGGAGATGATGGAGGGGAGGCAAGCGAGGAGTCAAAAGGGTTTGAGGAATCTAGAATCCCTACTGCATTTGTTGTTACCCCTGAGTACGGAGATGAGAGGACCAAAGCACGTGCAATGCTCTGTGATATATACCACCATGCTCTTCTTGATGAGTTCTCAATTGCTCGTGATCTGCTGCTTATGAGTCATTTGCAAGATAGTGTTCAGCATATGGACATCTCAACGCAGATACTTTTTAACAGGGCCATGTCACAATTAGGTCTATGTGCTTTTCGGGTTGGACTTATTTCTGAAGCTCATGGCTGTCTATCTGAACTATATTCTGGTGGAAGGGTGAAAGAGTTGCTTGCCCAAGGAGTGTCTCAAAGTCGTTATCATGAGAAGACTCCAGAACAGGAAAGGTTGGAAAGAAGACGGCAAATGCCATATCATATGCACATCAATCTTGAGCTCCTGGAGGCAGTACATCTTGTATCTGCTATGCTGTTGGAAGTTCCTAATATGGCAGCCAATGTTCATGATGCCAAACGCAAGGTCATATCTAAGACTTTCCGTCGCTTGCTTGAGGTGAGTGAGAAACAAACATTCACCGGTCCACCGGAAAATGTCAGAGATCATGTTATGGCCGCCATGAGGGTTCTTAGCAAGGGAGACTTCCAAAAGGCTTTTGACATTATTGTGTCTCTTGATGTATGGAAATTTGTTAGAAATCAAGACACCGTACTTGAAATGCTGAAGGACAAAATAAAAGAGGAGGAATTGAGGAGATACCTCTACGTTGTCTTCATCTTATGA | 2286 | 0.4418 | MVSTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVTESEKVPNLYIKALVMLEDFLAQALANKDAKKKMSSSNAKALNSMKQKLKKNNKQYEDLINKCRENPESDDEKEDEDSEDDYENAGDGPWDQKLSKKDRLLDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPNIVVDDSVEPDENETQKGIDYNGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLKDEPLFLVLAQNVQEYLERVGNFKAASKVALRRVELIYYKPQEVYDAMKKLTELTEDGDDGGEASEESKGFEESRIPTAFVVTPEYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELLAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLLEVPNMAANVHDAKRKVISKTFRRLLEVSEKQTFTGPPENVRDHVMAAMRVLSKGDFQKAFDIIVSLDVWKFVRNQDTVLEMLKDKIKEEELRRYLYVVFIL | 618 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste5g02544 | 618 | Hamap | Eukaryotic translation initiation factor 3 subunit C [EIF3C]. | 1 | 618 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Pste5g02544 | 618 | MobiDBLite | consensus disorder prediction | 107 | 122 | - | - | |
Pste5g02544 | 618 | MobiDBLite | consensus disorder prediction | 99 | 130 | - | - | |
Pste5g02544 | 618 | Coils | Coil | 76 | 103 | - | - | |
Pste5g02544 | 618 | ProSiteProfiles | PCI domain profile. | 497 | 618 | IPR000717 | - | |
Pste5g02544 | 618 | Pfam | Eukaryotic translation initiation factor 3 subunit 8 N-terminus | 120 | 529 | IPR008905 | GO:0003743|GO:0005852|GO:0006413|GO:0031369 | |
Pste5g02544 | 618 | MobiDBLite | consensus disorder prediction | 67 | 85 | - | - | |
Pste5g02544 | 618 | MobiDBLite | consensus disorder prediction | 66 | 85 | - | - | |
Pste5g02544 | 618 | Coils | Coil | 589 | 609 | - | - | |
Pste5g02544 | 618 | PANTHER | EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED | 1 | 613 | IPR027516 | GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste5g02544 | Pste-Chr5 | 17896004 | 17899255 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste5g02544 | 1 | 614 | Eukaryotic Initiation Factors Gene Family | AT3G56150 | 70.376 | 0.0 | 913 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste5g02544 | 5 | 17896004 | 17899255 | Pste7g02110 | 7 | 19360472 | 19362116 | ECH | |
Pste5g02544 | 5 | 17896004 | 17899255 | Pste5g02544 | 5 | 17896004 | 17899255 | ECH |