Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02532 CTAGGTTTGTTGCAACTTGCACTGGTCTCGTCCAAGGGTAAGCAACCATCCCAAAACCCTCAACAGCTGCCTTCCTCGTTCATCATTTACATTAGGATGGAGTCTCAGGTGAAGCATGCCATTGTTGTCAAAGTTATGGGTCGTACTGGATCCAGAGGACAGGTGACCCAGGTTAGAGTGAAGTTTTTGGATGATCAGAACCGTCACATTATGAGGAATGTGAAAGGACCTGTGAGAGAAGGAGACATTCTCACCCTACTTGAGTCTGAAAGGGAAGCAAGAAGGCTGCGGTAGATGGTTTTTGTTTTTTTTTTAGTTTGCCTGTAATCAATCAACACAATGTGGTTTTCTTGATTTTTATGGTAGTTACTACTTACAAGTTACAAGTTAGTGGATGCCCAAGGTTCTAGCACCCTATCTTCTTGAATCTGTTTGCGTTTGAATTATGGCTTGAATTTTGGATGTTTTTTAGTTTAAGCTTCAAGCTCTAAGTATGCGTTTGGATTAATGCATGATTTGGCTTCGAAACATGGTACTATTTCTGCTACGCCGTCC 555 0.418 LGLLQLALVSSKGKQPSQNPQQLPSSFIIYIRMESQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILTLLESEREARRLR 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02532 97 PANTHER 40S RIBOSOMAL PROTEIN S28 33 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pste5g02532 97 FunFam 40S ribosomal protein S28 32 97 - -
Pste5g02532 97 Gene3D - 31 97 IPR012340 -
Pste5g02532 97 SUPERFAMILY Nucleic acid-binding proteins 33 97 IPR012340 -
Pste5g02532 97 Hamap 30S ribosomal protein S28e [rps28e]. 33 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pste5g02532 97 CDD S1_S28E 38 97 IPR000289 GO:0003735|GO:0005840|GO:0006412
Pste5g02532 97 ProSitePatterns Ribosomal protein S28e signature. 88 96 IPR028626 -
Pste5g02532 97 Pfam Ribosomal protein S28e 36 96 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02532 Pste-Chr5 17801745 17802724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02532 33 97 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 87.692 9.80e-36 114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02532 5 17801745 17802724 Pste5g02532 5 17801745 17802724 ECH