LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste5g02517	CACAACACCATTGACATTGGCATTGGCAAAACACAAAAGCTAGCTGTCTATGGGTTCCCTTCCCAACGTAGTAGAGGACTGCATGGGCTTACTCCAACTCTATAGCGATGGCTCCGTTTTCCGTTCCAACCACATAAATTTCAAAGTTTCACCCATTGAAGACAATTCTATAGCCTTCAAAGACTACCTCTTTCACAAAAAATTCAACCTTTCTCTTCGCTTTTACAAGCCCAGACACTGTAACAACCTCCCTATTGTGATTTTCCTTCACGGGGGAGGCTTTTGTTTCGGTTCACGCACGTGGCCCCATATTCACAACTGTTGCATGCGCCTCGCCTCCGCCCTCCAGGCTGCCGTCGTCTCTCCCGACTACCGTTTGGCCCCCGAGCACCGCCTTCCCGCGGCGGTCGACGACGCCCTCGAGGCCCTCAGCTGGCTCCACACTCACCGACTCACCCTCATTAATGGTGGGGACGTTGACTTTGACCGTCTTTTTCTAGTTGGTGACTCCTCTGGTGGGAACATTGCCCACCACCTCGCAGTTCGCTTCGCCTCCGCTTCCAGACACATCAATCCGCTTCGCATACGAGGTTACGTCTTGTTTGCGCCGTTTTTTGGCGGGGAGCTTCGGACCAACTCCGAGCAAGGTCCCCCTGAGCACATGTTGAACCTTGAGTTATTAGACAGATTTTGGAGGCTATCGATGCCAGTTGGAGAGACCAGAGATCACCCATTGGCGAATCCATTTGGACCAGAAAGCCCAAATCTTGAAGAAATCAAGCTTGGTCCTATTTTGGTGATAGTTGGTGGCAATGAATTGCTTAAGGATAGGGCAAAAGACTACGCTAAAAGGTTAAAAGAATTAGACAAGGACATTAAATACGTTGAGTTTGAGGGGTGCGAGCATGGGTTTTTCACGCATGATTCATACTCATCAGAAGTTGCAGAAGATGTCATCCAAATCCTTAAACGATTCATGCTTGAAACTTCTAGTTAGAAGGAATGTAACTGAAAAAAAAAATACTTAAAGAGTACAAAGAAACTCGTGTAGTCTATATATATTTTTAGCCAAGTAATTAAAGTAGTTTAGTTGGGAATGAATATCAATTTTATGGTGTGTATGTGTGTAGTTTTTCATTAGAGATTGTAGTAAAGTGTCTCTCTTAACAGTTTGTGTTGGAAAATTGATGTATTACAATAGG	1202	0.4542	MGSLPNVVEDCMGLLQLYSDGSVFRSNHINFKVSPIEDNSIAFKDYLFHKKFNLSLRFYKPRHCNNLPIVIFLHGGGFCFGSRTWPHIHNCCMRLASALQAAVVSPDYRLAPEHRLPAAVDDALEALSWLHTHRLTLINGGDVDFDRLFLVGDSSGGNIAHHLAVRFASASRHINPLRIRGYVLFAPFFGGELRTNSEQGPPEHMLNLELLDRFWRLSMPVGETRDHPLANPFGPESPNLEEIKLGPILVIVGGNELLKDRAKDYAKRLKELDKDIKYVEFEGCEHGFFTHDSYSSEVAEDVIQILKRFMLETSS	315

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste5g02517	315	Coils	Coil	255	275	-	-
	Pste5g02517	315	PANTHER	ARYLACETAMIDE DEACETYLASE	13	289	-	-
	Pste5g02517	315	SUPERFAMILY	alpha/beta-Hydrolases	4	308	IPR029058	-
	Pste5g02517	315	Gene3D	alpha/beta hydrolase	15	314	IPR029058	-
	Pste5g02517	315	Pfam	alpha/beta hydrolase fold	70	289	IPR013094	GO:0016787

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste5g02517	Pste-Chr5	17689766	17693094	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste5g02517	7	304	Carbohydrate Esterase	AT5G16080	34.395	4.00e-53	176

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste5g02517	5	17689766	17693094	Pste5g02517	5	17689766	17693094	ECH
	Pste5g02517	5	17689766	17693094	Pste4g02773	4	19554921	19561449	PCT

Showing 1 to 2 of 2 entries