Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02511 GCAATGGTTGAGTGAAGACATGGCAGAGATTCGACGGTGGCTATTTGTAACTGCCGTGTTGGATGGAGCAAACTTTGGCGGCGGCATAGAAGGTGAAGGAAGGAGCAAACCTTCCCAGAGCCGAACAACTGGATCCACTTGGGGACGAACCGCGAGTTCTCCTAAGGAAGCACCACTTCACACTCAAGCTGGACCATACTCACTTTCGTTAATGGGTTTCACCAAGTGTGGGAATTTGCTCTGCCTTTTACTCAAACTTAAACTTTGTTTAATTTTATCAGATTTTGGCACTGCTGTTGACACAATAACCTCATATCAGTTCATCAAGGACCCTGAAACTATAACCTCCAGAGGTGGTAACTTCACTTTGGGTTTCTTCACTCCTCAAAATTCTACAAATCGCTACGTGGGAATTTGGTGGCAGCCCAAATTCACTGTCATATGGGTTGCTAACAGGGACCAACCGCTGAATGATTCTTCTGGAGCGGTTACCATATCTGAAGATGGCAATCTTGTGGTTCTGAATGGACAGAAACAAGTCATTTGGTCATCAAATTTGAATGTGTCCAGTGTTGGATCCAACTCTATTGCCAAACTTTTAGATTCTGGGAACCTGGTAGTAATGGAAAACACAGCAGGAAGTAAAATATGGGAGAGTTTCCAGCATCCTTCTAATGTGATGTTACCAAATATGAAGCTTAGAACTAACAAAGTAACAGGTGAGAAAGTAAAACTAACTTCATGGAAAAGCGCTTCTGATCCATCCACAGGAAGCTTCTCTTTAGGTGTTGAACGCCTTAGTATACCTGAAGTGTTCATTTGGAATGAAACTAGTCCATTCTGGCGCACTGGTCCGTGGAACGGTAAGGCCTTTACAGGGCTTCCCTATATGAAAACATTTTATCTTAGGGGGTTTCATGTTGGAGATGATGGGCAAGGAAATGTTGAACATTCTTTTACGGATGTAGAAGAGATTGGTTTGGTAATCTATATTCTGAATTCAACAGGAAATTGTGAAGAGAGGTTGTGGAATGGAGGGAAGAAAGAATGGGTAGTCACATGGAATAGTCATCAATTTGAGTGTGATTATGGTATATGTGGAGCTTTTGCAATCTGTAACTCACAGAGCTCACCAACATGCAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAGGAATGGGATAGACAAAACTGGACTAGTGGATGTGTTAGGAGTGCTCCTCTGCAGTGTGAAAGAGCCAACAACCAAAACACAAGTACAGATTATAAAGCAGATGGGTTTTTGAAACTGAAGACGATCAAAGTTCCAGATTTTGCAGATGGGTCATCACTCAGACTTCAACCAGAGACTTGCAGAAGCCGATGTTTGGAGAATTGCTCTTGCATTGCATATTCATATGATGCTGAGATTGGTTGTATGTCTTGGAGTGGTAATCTAATTGACATACAACAGTTGTCAAATGGAGGACTTGATCTATATATCCGTGTAGCCTACACAGAACTTGATAAAGAGACTAACAGTTTCATCATCATTATTGTCACAGTGACAGTAGGAACTACCTTAATTGTCATTTGTGCATATATCATGTGGACAAGGATTTCTAACCACCGCGTGAAAAGGATCGTCAAAGGATTCCTTCAATTTGATGGAGGTCGAGCACCTGTAAAATATACAAGTGACAACGTATTTGGTGATCTCTCACAAGTCAAACTTCAGGAGCTATTAATATTTGATTTGGAAAAGCTTGTAACTGCCACAAACAACTTTCATCTATCTAACAAACTTGGCCAGGGTGGTTTTGGTCCAGTATATAAGGGGCAATTGCACGACGGTCTAGAAATTGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTTATGAATGAAGTTATAGTGATTTCTAAACTTCAACATCGCAATCTTGTAAGACTTTTGGGCTGCTGTGTTGAAGGGGAGGAAAAGATGTTGATTTATGAATACATGCCAAATAAAAGTTTGGACGCGTATGTCTTTGATCCATCAACAAGTAAAGCTCTTGATTGGAGAAAACGCTTTGCCATAATAGAAGGGTTAAAAATCATCCACAGAGACTTGAAGGCAAGTAATATTTTGCTAGATGTGGAGCTAAATCCAAAAATATCTGACTTTGGCCTGGCTAGAATATTTGGTGGGAATGTGGATCAGGCCAATACTAAAAGAGTTGTTGGAACATATGGTTATATGTCACCTGAATACGCAATGCAAGGACTATTTTCTGAAAAATCAGATGTCTTTAGCTTTGGAGTTTTACTGCTGGAGATTGTTAGTGGAAGACGGAATTCAAGCTTTTATGCTGACGAGAATTCCCTTACCCTTTTAGGATTGGCCTGGATAAAGTGGAGAGAAGACAATATTTCATCCTTAATAGATCCTGGAATCTATGATCCTAGCCACCGTAACTATATTTTCAGGTGTATGCACATAGGACTCCTTTGTGTGCAAGAATTTGCTGCAGATAGGCCCACTATGTCTGTTGTTATTTCTATGCTTAACAGTGAGATTGTTGATCTTCCTCCTCCAAGGAAACCGGCATTCATCCTGAGGCAAAATATGTTAAGTTCAGTGTCCTCTGTAAGAAGTAAAGCCTTGAACTCACATAACTTTGTCAGTATTACGGACATCCAAGGCAGATAGAAATCCAAGGGCACCAAGAAAGGTATATGGTGGCAATGGATAATACTACAGCAGATTGTTGGAACTTGGAATATTGTAGGTACCCTTTTTATGTAAAAAGATACACATACAATGGAAGGCAATTTAGAGAGAAATTTGAAGTCGTAAAACTGATTTAAAATAGTTGAACGATAGAGGAAAATTTAATACTAACACGGAGATATATAAATTGGAGGAAAGACTATGAGTGGATGTTATATGAGGGATATGAGTGGATGTTTATCAATCGATGTAATGGTAAAAAGTCTGACGATGACAAAAAACTTTCATATGTGGTGTGAATATTATCATTATGTGAGTTTGTGCATTCACAATTTCTATCACTTA 3055 0.3971 MAEIRRWLFVTAVLDGANFGGGIEGEGRSKPSQSRTTGSTWGRTASSPKEAPLHTQAGPYSLSLMGFTKCGNLLCLLLKLKLCLILSDFGTAVDTITSYQFIKDPETITSRGGNFTLGFFTPQNSTNRYVGIWWQPKFTVIWVANRDQPLNDSSGAVTISEDGNLVVLNGQKQVIWSSNLNVSSVGSNSIAKLLDSGNLVVMENTAGSKIWESFQHPSNVMLPNMKLRTNKVTGEKVKLTSWKSASDPSTGSFSLGVERLSIPEVFIWNETSPFWRTGPWNGKAFTGLPYMKTFYLRGFHVGDDGQGNVEHSFTDVEEIGLVIYILNSTGNCEERLWNGGKKEWVVTWNSHQFECDYGICGAFAICNSQSSPTCSCLKGFEPRNKEEWDRQNWTSGCVRSAPLQCERANNQNTSTDYKADGFLKLKTIKVPDFADGSSLRLQPETCRSRCLENCSCIAYSYDAEIGCMSWSGNLIDIQQLSNGGLDLYIRVAYTELDKETNSFIIIIVTVTVGTTLIVICAYIMWTRISNHRVKRIVKGFLQFDGGRAPVKYTSDNVFGDLSQVKLQELLIFDLEKLVTATNNFHLSNKLGQGGFGPVYKGQLHDGLEIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNKSLDAYVFDPSTSKALDWRKRFAIIEGLKIIHRDLKASNILLDVELNPKISDFGLARIFGGNVDQANTKRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNSSFYADENSLTLLGLAWIKWREDNISSLIDPGIYDPSHRNYIFRCMHIGLLCVQEFAADRPTMSVVISMLNSEIVDLPPPRKPAFILRQNMLSSVSSVRSKALNSHNFVSITDIQGR 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02511 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Pste5g02511 889 Pfam PAN-like domain 418 477 IPR003609 -
Pste5g02511 889 SUPERFAMILY alpha-D-mannose-specific plant lectins 131 248 IPR036426 -
Pste5g02511 889 ProSiteProfiles Bulb-type lectin domain profile. 93 214 IPR001480 -
Pste5g02511 889 PIRSF SRK 67 889 IPR024171 GO:0004674
Pste5g02511 889 CDD PAN_AP_plant 402 492 - -
Pste5g02511 889 Pfam Protein tyrosine and serine/threonine kinase 585 840 IPR001245 GO:0004672|GO:0006468
Pste5g02511 889 SMART serkin_6 584 829 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02511 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 660 850 - -
Pste5g02511 889 SUPERFAMILY Protein kinase-like (PK-like) 569 876 IPR011009 -
Pste5g02511 889 SMART ntp_6 417 491 IPR003609 -
Pste5g02511 889 Pfam S-locus glycoprotein domain 275 383 IPR000858 GO:0048544
Pste5g02511 889 SMART blect_4 99 217 IPR001480 -
Pste5g02511 889 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 81 833 - -
Pste5g02511 889 CDD B_lectin 100 217 IPR001480 -
Pste5g02511 889 ProSiteProfiles PAN/Apple domain profile. 405 492 IPR003609 -
Pste5g02511 889 Gene3D Phosphorylase Kinase; domain 1 551 659 - -
Pste5g02511 889 Gene3D - 89 215 IPR036426 -
Pste5g02511 889 MobiDBLite consensus disorder prediction 24 52 - -
Pste5g02511 889 ProSiteProfiles Protein kinase domain profile. 584 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02511 889 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 89 214 - -
Pste5g02511 889 Gene3D Transferase(Phosphotransferase) domain 1 660 848 - -
Pste5g02511 889 Pfam D-mannose binding lectin 139 243 IPR001480 -
Pste5g02511 889 MobiDBLite consensus disorder prediction 29 51 - -
Pste5g02511 889 FunFam receptor-like serine/threonine-protein kinase SD1-8 559 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02511 Pste-Chr5 17629561 17637713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02511 500 857 Receptor kinase-like Gene Family AT4G23230 47.709 9.06e-109 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g02511 PK_Tyr_Ser-Thr 3.4e-41 CL0016