Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02509 ATTATTGCATCATCTCAGTTCATCAAGGGCCCTGAAACTCTTACTTCCAAAGATGGTAACTTCACTTTGGGGTTCTTTACCCCTCAAAACTCTACAAAACGCTATGTTGGAATTTGGTGGAGGCCTCAGTCCACAGTCATATGGGTTGCTAACAGAAACCAGCCACTGAATGATTCTTCTGGAATTGTTACAATATCTGAAGATGGCAATCTTCTGGTGCTGAATGGACAGAAACAAGTTATTTGGTCATCAAATGTATCCAGTACTGACAGCGCATCATTCAATACAAGTTCCCAGTTTTCAGATTATGGAAAGCTTGTACTCATGGAAACAGCAACGGGAAACATCTTATGGGATAGTTTTAAGGAACCTTCACATACATTATTGCCTGGCATGAAACTATTAAGAAGCAAAAGAAAAGGTACGAAAGTAGAACTTACATCATGGAAAAGTCCTTCTGATCCCTCTGTGGGGAGCTTCTCTTTCAATATTGTTCAACGCATAAATATAGTTGAAGTGTTTATTGGTAACGGAAGTCGACCGTACTGGCGCAGTGGTCCATGGAATGGTGGAGTATTTACAGGGATACCAGAAATGTCACCATATGTTAATGGTTATAAAGGTGGGGATGATGGGGAAGGAAATATAGATATCTATTACACTGTGCCAGACGAATTACGATTTGTAATCTATGCATTTAATTCGCAAGGCCAATTAGAACTAAAATGGTGGTATGAAGAGAAGAAAGAAATGATAGTTGTATGGAGTAGTCGAGAATCAGATTGTGATGTTTATGGTATGTGTGGACCATTCACTAGCTGTAATGCAGAGAGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAGCCGAGGAACAAAGAGGAATGGAATAGACAAAACTTGACTGGTGGATGTGCTAGGAGGACACCTCTGCAGTGTGAAAGGGTCAAACATCAAAACACAAGTACAGATACAAAGGAAGATGGATTTTTTAAACTGAAAATTGTTAAAGTTCCAGATTTTGCAAAAGGGTCTCCTGTTACACTAGACATATGCAGAAGGCAATGCTTGGAGAATTTCTCTTGTGTTGCATATTCTCATGATGAAGGGATTGGTTGCATGTCTTCGACTGGGAATCTACTTGACATGCAACAATTCTCATGTGGAGGACTTGATCTATATGTTCGTGTAGCCTACACTGAACTCGATAAAGGGACAAAGACAAAAAAGATCATCGCAATAACAGTGATAATAGGAATTGTCATCATTGTCACTTGTGCATGCGTCAACTGGAAGACTTCCAATCATCCAGTTAAGCTCCAGGAGGTGCTACTGTTTGATTTCGGAAGGGTTGCAATAGCCACAAACTACTTCCACCAGTCCAACAAACTTGGACAGGGTGGATTTGGTCCTGTATACAAGGAGAAACTGCAAGATGGACAGGAAATTGCTGTTAAACAACTTTCTAGAACCTCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCACAATCTTGTAAGACTTTTGGGTTGCTGTGTCAAAGGTGATGAAAAAATGTTGATATATGAATACATTCCAAACAAAAGTTTAGATTTGTTTATATTTGATCAATCAAGGAGTAAACTCCTCGATTGGAGGAAGCGTAGTAACATAATAGAAGGAATAGCTAGAGGTATGCTTTATCTACATCAAGACTCCAGACTAAAAATTATACATAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAAGAGTTGAATCCAAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGTGTAAGTATGCTTTCTTTCTCCAATATTGGAGTAAAAATACTTGTACAATTAATTTTTACATTTGAATGTATTGGCTATATGTCTCCTAACTATGCAATGCAAGGACTATTTTTAGAGAAATCAGGTGTCTTTAGTTTTAGTGTTTTACTACTGGAGATTGTTAGTGGGAGAAGAAACTCAAGTTTTTATGACAATGTGCATCCTCTTAGCCTTTTAGGATTTGGCTGGATACAATGGAGGGAAGGGAATACGTTATCTTTAATAGATCGAGAAGTATACAATCCTAGTCATTATGAAGATATTTTAAGGTGCATACACATAGGACTTCTATGTGTACAAGACCTTGCTGTAGGCAGGCCAACCATGGCAGCGGTAATTTCTATGCTTAGCAGTGAGGATGCACTTCCTCGCCCTAGTCAACCGGCATTCATCCTGCAGAAAAATATGCTGAATTTGGCATCATCTGAAGAAACTCATAGATTTTGCTCCATTAATGTTGTTAGTGTTACAGACATCCATGGTAGA 2352 0.3856 IIASSQFIKGPETLTSKDGNFTLGFFTPQNSTKRYVGIWWRPQSTVIWVANRNQPLNDSSGIVTISEDGNLLVLNGQKQVIWSSNVSSTDSASFNTSSQFSDYGKLVLMETATGNILWDSFKEPSHTLLPGMKLLRSKRKGTKVELTSWKSPSDPSVGSFSFNIVQRINIVEVFIGNGSRPYWRSGPWNGGVFTGIPEMSPYVNGYKGGDDGEGNIDIYYTVPDELRFVIYAFNSQGQLELKWWYEEKKEMIVVWSSRESDCDVYGMCGPFTSCNAESSPICSCLKGFEPRNKEEWNRQNLTGGCARRTPLQCERVKHQNTSTDTKEDGFFKLKIVKVPDFAKGSPVTLDICRRQCLENFSCVAYSHDEGIGCMSSTGNLLDMQQFSCGGLDLYVRVAYTELDKGTKTKKIIAITVIIGIVIIVTCACVNWKTSNHPVKLQEVLLFDFGRVAIATNYFHQSNKLGQGGFGPVYKEKLQDGQEIAVKQLSRTSGQGLEEFMNEVVVISKLQHHNLVRLLGCCVKGDEKMLIYEYIPNKSLDLFIFDQSRSKLLDWRKRSNIIEGIARGMLYLHQDSRLKIIHRDLKTSNILLDEELNPKISDFGMARIFGVSMLSFSNIGVKILVQLIFTFECIGYMSPNYAMQGLFLEKSGVFSFSVLLLEIVSGRRNSSFYDNVHPLSLLGFGWIQWREGNTLSLIDREVYNPSHYEDILRCIHIGLLCVQDLAVGRPTMAAVISMLSSEDALPRPSQPAFILQKNMLNLASSEETHRFCSINVVSVTDIHGR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02509 784 Pfam S-locus glycoprotein domain 183 291 IPR000858 GO:0048544
Pste5g02509 784 SMART serkin_6 458 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02509 784 FunFam receptor-like serine/threonine-protein kinase SD1-8 431 533 - -
Pste5g02509 784 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 729 - -
Pste5g02509 784 Pfam PAN-like domain 325 383 IPR003609 -
Pste5g02509 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Pste5g02509 784 PIRSF SRK 1 784 IPR024171 GO:0004674
Pste5g02509 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 534 746 - -
Pste5g02509 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 36 155 IPR036426 -
Pste5g02509 784 ProSiteProfiles Bulb-type lectin domain profile. 1 121 IPR001480 -
Pste5g02509 784 CDD B_lectin 5 124 IPR001480 -
Pste5g02509 784 ProSiteProfiles Protein kinase domain profile. 458 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02509 784 Gene3D - 1 121 IPR036426 -
Pste5g02509 784 SUPERFAMILY Protein kinase-like (PK-like) 434 738 IPR011009 -
Pste5g02509 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 121 - -
Pste5g02509 784 Pfam Protein tyrosine and serine/threonine kinase 459 668 IPR001245 GO:0004672|GO:0006468
Pste5g02509 784 Gene3D Transferase(Phosphotransferase) domain 1 534 746 - -
Pste5g02509 784 SMART ntp_6 325 397 IPR003609 -
Pste5g02509 784 CDD PAN_AP_plant 309 398 - -
Pste5g02509 784 Gene3D Phosphorylase Kinase; domain 1 424 533 - -
Pste5g02509 784 Pfam D-mannose binding lectin 45 150 IPR001480 -
Pste5g02509 784 ProSiteProfiles PAN/Apple domain profile. 313 398 IPR003609 -
Pste5g02509 784 SMART blect_4 5 124 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02509 Pste-Chr5 17614863 17618326 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02509 442 784 Receptor kinase-like Gene Family AT4G23140 50.430 2.31e-106 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g02509 PK_Tyr_Ser-Thr 8.7e-39 CL0016