Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02505 ATGAATGTGTCCTACAAGGTCGTGATTAAAGGCTTGACTACAACTAAGGAGAAGGATATCTTGAAGGGGATAACTGGTTCTGTACATCCTGGGGAAGTTTTAGCATTGATGGGCCCTTCAGGAAGTGGAAAGACATCTTTGCTAAATCTGCTAGGAGGAAGGTTAATTCAGTCCACAATTGGTGGTTCTATCACTTACAACGATCAACCTTATTCCAAGTTCCTAAAGAGCAGGATTGGATTCGTGACACAAGATGATGTTCTGTTTCCTCACCTTACTGTAAAAGAGACATTGACATATGCAGCCCGCCTAAGATTGCCAAATACGTTAACGAGAGAGCAGAAGGAAAAACGAGCCTTAGATGTCATCGAAGAGCTGGGATTGGACAGGTGCCAAGACACTATGATAGGAGGTTCCTATGTTCGAGGAGTATCAGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATCATAATCAACCCTTCTCTTGTGTTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATAGTTCAGATGCTACATGACACAGCAGAGGCAGGTAAAACCGTAGTGACAACAATCCATCAACCATCAAGCAGACTCTTCCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGAAGCTTGCTTTACTTTGGAAAAGCATCTGAAGCAATGGACTATTTCGGGTTCATAGGATGTGCACCTCTTATTGCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACGTAAATGATATTTCTGTACCGTCAGAGCTAAAGGACAAAGTGCAGGTGGGAAGTGCTGAAGCTGAAACAAGCAATGGAAAACCATCAGCTTCAGTTGTACAAGAGTATCTGGTGGAGGCATATGATTCTCGAGTTGCAGAAATAGAAAAGACAAAGTTAATGGTTCCTGTCCCCCTCGATGAAGAAATGAAGTCTAAGGTTTGTTCAAGTAAAAGACAGTGGGGAGCAAGTTGGTCTGAGCAATTTTCCATATTATTTTCAAGAGGATTCAGAGAACGGAGGCATGACTACTTTAGCTGGTTGAGAATCACTCAAGTTCTTTCCACTGCAGTGATCTTAGGATTACTATGGTGGCACTCAGATGCTAAAACCCCAAAAGGTTTGCAAGACCAGGCAGGACTGCTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGAACCATGCTGACTAAGGAACGAACTACGGATATGTATAGACTAAGTGCATATTTCGTGGCAAGAACTACAAGTGACCTTCTACTAGATCTGGTATTACCAGTGCTTTTCCTCCTCGTTGTTTATTTCATGGCCAATTTGAGACTCGGTTCTGGGCGTTTTTTCCTTAGTATTCTTACCGTTTTTCTCTGCATCATAGCAGCTCAGGGTCTTGGACTTGCCATTGGGGCTACATTAATGGACTTGAAGAGGGCAACAACCTTGGCTTCAGTAACTGTCATGACTTTCATGCTGGCTGGAGGTTTTTTTGTGAAGAAAGTCCCTATATTTATATCATGGATTCGCTACTTATCTTTCAACTACCATACGTATAAACTTTTGCTCAAGGTTCAATATGAACACATTACACCTGTCATAAATGGGATCAGAATTGACAGTGGATTCACGGAGGTTGCAGCTCTGATAGCCATGATTTTTGGTTACCGTTTATTGGCATATGTTTCTTTACGGCGGATGAAACTTCAAGCTGGAAATTGAGAGTTTCCATTAAGGAAAATTGATATTGAATGACAACTCATAACTATATTATATGTAAAGAAGACTACCGAGTGAAGTGCACTTAATTTGTCTAATGTATTGTTTCATTTAGATGTTCAAGCAACAAAAGGGTGCTTGAATATCACGTGGCATATCAATATGAAAGAGTTCAGAGAAAATGCTTTTCGAAATTCTTAACTCTTAGGATGTGTAGCCCTTCTTATTAGACGTGTTTCATTAACTCATGTTCGTAACTCTGATAGTTAGGAATTAAAGTTGATTGTGCAACATATTTGTATTATGCCACATTTTCACCTGCTATACTAGTCAAGTTTCAC 2123 0.4018 MNVSYKVVIKGLTTTKEKDILKGITGSVHPGEVLALMGPSGSGKTSLLNLLGGRLIQSTIGGSITYNDQPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPNTLTREQKEKRALDVIEELGLDRCQDTMIGGSYVRGVSGGERKRVCIGNEIIINPSLVFLDEPTSGLDSTTALRIVQMLHDTAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMDYFGFIGCAPLIAMNPAEFLLDLANGNVNDISVPSELKDKVQVGSAEAETSNGKPSASVVQEYLVEAYDSRVAEIEKTKLMVPVPLDEEMKSKVCSSKRQWGASWSEQFSILFSRGFRERRHDYFSWLRITQVLSTAVILGLLWWHSDAKTPKGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERTMLTKERTTDMYRLSAYFVARTTSDLLLDLVLPVLFLLVVYFMANLRLGSGRFFLSILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVKKVPIFISWIRYLSFNYHTYKLLLKVQYEHITPVINGIRIDSGFTEVAALIAMIFGYRLLAYVSLRRMKLQAGN 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02505 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 238 IPR027417 -
Pste5g02505 594 ProSitePatterns ABC transporters family signature. 144 158 IPR017871 GO:0005524|GO:0016887
Pste5g02505 594 Pfam ABC-2 type transporter 339 548 IPR013525 GO:0016020|GO:0140359
Pste5g02505 594 Gene3D - 3 236 IPR027417 -
Pste5g02505 594 FunFam ABC transporter G family member 22 8 238 - -
Pste5g02505 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 582 - -
Pste5g02505 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 244 IPR003439 GO:0005524
Pste5g02505 594 Pfam ABC transporter 21 172 IPR003439 GO:0005524
Pste5g02505 594 SMART AAA_5 30 221 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02505 Pste-Chr5 17596144 17600810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02505 20 273 Calmodulin-binding Proteins AT2G36910 27.308 2.15e-13 71.6