Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02504 AACATGGAAGCCACAAAGTAATAGAAGAACTGTCACAAGTTAAACTCCAGAAGCTGTTGCTGTTTGATTTCAAAATGGTTGCAATAGCCACAGACAACTTCCACTTGTCCAACGAACTTGGGCAGGGTGGATTTGGCCTTGTAGCATCTGGGCAAGGTCTAGAAGAATTCATGAATGAAGTAATGGTGATTTCCAAGCTTCAACATGGTAACCTTGTAAGACTTTTTGGTTGTTGTTTTGAAAGTGATGAAAAGATATTAATATATGAATACATGCCAAACAAAAGTTTGGATTATATATTTTTTAATCCATCAAAAAGTAAACTTCGGGATTGGAGGCAACGTTGTAACATAATAGAAAGAATAGCTTGGGGATTGCTTTATCTTCATAGAGACTTCAGACTAAGAATCATACATATGAGATTTGAAAACAAGCAAATACAAAAAGGGTTGTTGAAACCTAATAAGTATACTTTCTCTGTGTCCAATATTATAGTAAATTATGTGGATAATCAATTTCTAGATTTGAATAAAATGATTGTTAGTGGAAGAAGAAACTCAAGCTTTGATGAAAATGAACATGCTCTTTGCCTTTTAGAATTTGTGAGTCTCCACTATTCATTTTTAACACATTTACCTAAATTCTTGCCTTTAGCTAAAATAACTCGAAATACAAATATATTATCTTTAATAGACCCAATATATGATCCTAATCATCATAAAGATATTTTAAGGTGCACAGACATAAGACTTCTATGTGTACAAGAATATGCTAAAGACAAGCCTACTATGACAACAATCATTTCCATGTTCAATAATGATGTTGCATTTCATCCTCCTCCAAGTAAACCTGCATTCATACGTAGGCATTCATACTTAGGCAAAATATGT 890 0.3292 MVAIATDNFHLSNELGQGGFGLVASGQGLEEFMNEVMVISKLQHGNLVRLFGCCFESDEKILIYEYMPNKSLDYIFFNPSKSKLRDWRQRCNIIERIAWGLLYLHRDFRLRIIHMRFENKQIQKGLLKPNKYTFSVSNIIVNYVDNQFLDLNKMIVSGRRNSSFDENEHALCLLEFVSLHYSFLTHLPKFLPLAKITRNTNILSLIDPIYDPNHHKDILRCTDIRLLCVQEYAKDKPTMTTIISMFNNDVAFHPPPSKPAFIRRHSYLGKIC 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02504 272 SUPERFAMILY Protein kinase-like (PK-like) 3 114 IPR011009 -
Pste5g02504 272 Pfam Protein tyrosine and serine/threonine kinase 29 107 IPR001245 GO:0004672|GO:0006468
Pste5g02504 272 Gene3D Transferase(Phosphotransferase) domain 1 2 252 - -
Pste5g02504 272 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02504 272 SMART tyrkin_6 9 246 IPR020635 GO:0004713|GO:0006468
Pste5g02504 272 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 155 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02504 Pste-Chr5 17593714 17595152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02504 5 265 Receptor kinase-like Gene Family AT4G11480 36.393 4.83e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g02504 PK_Tyr_Ser-Thr 2.5e-11 CL0016