Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02500 GGTATTTCCATAGACACCATCACGTCATCTCAATCCATCAAGGATCCTAAAACTAAAAGGACTAACGATGGTAACTTCACCTTGGGGTTCTTCACCCCTCAATACTCTACAAACCGCTATGTAGGAATTTGGTGGAAGCCTCAGTGCACAGTGATATGGGTTGCTAACAGAAACCAACCACTGAATGATTCTTCTGGGATTGTTACAATATCTGAAGATGGTAATCTTGTGGTTCTTAATGGACAGAAACAAGTTATTTGGTCTACAAATGTTCGCAATGCATCATCAAACACAAGTGCCAAGATTTCAGAATATGGTAAACTTGTCCTCACAGAAACCACAACGGGGAACATCTTATGGGATAGTTTTCAGCAACCTTCCAATACATTATTGCCTGGCATGAAACTTCCAACCAATAGAACAGGTGAAAATGTTGAACTTAGATCATGGAAAAGCCCTTCAGATCCCTCTGTTGGGATCTTCTCTTCCAATATTGTTCCACGGATAAATATAGTTGAAGTGTTGACTTGGAATGAAACTCTACCATACTGGCGCAGTGGTCCATGGAATGGTGCTGGGGTCTTTAAAGGGATACCAACCATGACAACGTACCTTAACGGTTTCAAAAGTGGGGATGACGAGGAAGATATCTATTTTACAATACCAAGTGGATCAGATTTTTTTATGTATGTATTGAATTCTAAAGGCCAATATGAAGAAACATGGTGGGATTATGAGAAGAAAGAAATGCAAGTTTCATGGACTAGTCGACAATCAGATTGTGATGTTTATGGTATATGTGGTTCCTTTGCAATCTGTAATGCACAGAGCTCACCACTATGCAGATGTTTAAAAGGGTTTGAGCCAAGGAACAAAGAGGAGTGGAATAGACAAAACTGGACTAGTGGATGTGTTAGGAGCAAAGATTTGCAGTGTGAAAACGTCAAAGATCAAAACACAGATACATACACAAAGGAAGATGGATTTTTTAGACTGCAAATGATTAAAGTTCCAGATTTTCCAGAAGTTTCTCCTGAGTTGCCAGACATATGCAGAAGTCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCTCACGATGATGAGATTGGTTGTATGTCTTGGACAGAGAATCTAATTGACATTCAACAATTCTCACATGGAGGACTTGATCTATATGTTCGTACAAATACAAAAATCATCGTTACAATTACAGTGATAATAGGAACTGGCATCATTGTTACTTGTGCGTATGTCATGTGGAGGACCTACAATTATCCAGTTAGATTAGAGTGGAAAAGGTACATCAAAACTTACCAGCGATTTAACAATGGTGAAACACATGAAGATCGACACCACAAAGTAATTCAAGAACTGTCACAAGTTAAACTCCCGGAGCTGTTGCTGTTTGATTTCCAAAGGGTTGCAACAGCCACAAACAATTTCCACCTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGTAAACTGCAAGATGGACTGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGCTGCTGTATTGAAGGTGATGAAAAGATGTTACTGTATGAATACTTGCCAAACAAAAGCTTGGATATGTTTATCTTTGATCAATCAAAAAGTAAACTCCTAGATTGGAGGAGGCGCAGTAGAATAATAGAAGGAATAGCACAAGGATTACTTTATCTTCACAGAGATTCCAGACTAAGAATCATACACAGAGACTTGAAGGCAAGTAATATCTTGTTAGATGAAGAGCTAAATCCAAAAATATCAGACTTTGACATGACTAGAATCTTTGGAGGGACTGAAGATCAGGCCAACACTAATAGGATTGTTGGAACCTATGGCTATATGTCTCCTGAGTATGCAATGCAAGGTCTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGCGTTTTGGTGCTAGAGATTGTTAGTGGAAGAAGAAACTCGAGCTTTTACGACAATGTGCATGCCCTTAGCCTTTTAGGATTTGCCTGGATACAATGGAAAGAAGGAAATATATTATCTTTAATTGATCCAGAAATATATGATCCTAGTCATGATGAAGATATTTTAAGGTGCATACACATAGGACTTCTATGTGTAGAAGAACTTGCTGTAGACAGACCAACTATGGCTACTGTAATTTCTATGCTTAACAGTGAGGTAGCGTTTCTTCGTGCTCCAACTCAACCTGCATTCATCCTGAAGCAAAATATGTTGAATTCGGTATCGTCTGAAGAAAGTCATAGATCTTGCTCCATCAATACAATTAGTATTACAGATATCCATGGCAGCATCCATGCAAACTTGTTTTTTGCTTTGTTCACATTGTACTGTTGTTATGTGCTGGATGTTGGTATTGCCAGAGACACCATCACATCATCACAAACTATCAAGGACCATGAAACTCTAAGGTCCAAAGATGGTAACTTCACTTTGGGGTTCTTTACCCCTCAAAACTCTACAAAGCGCTACGTTGGCATATGGTGGAAGTCTCAGTCCACAGTCATTTGGGTTGCTAACAGAAACCAACCACTGATTCTTCTGGAATTGTTACAATATCTGAAGATGGCAATCTTAAGCATGTTATTTGGTCAACCAATGTATCTAATGCATCATCCAATACAAGTGCCCAACTTTTCACAATATGGTAAGATTGTCCTCTTGGAAACCACAACAGGAAACATCTTATGGGATAGTTTTCAGCAACCTTCTGATACAATGTTGCCCAACATGAAACTCTCAAGCAACATAAGAAGAGTTACGAAAGTAGAACTTACATCATGGAAAAGTCCTTCTGATCCCTCCAATGGGAGCTTTTCTTCCAGTGTTGTTCAACGCATAAATATACTTGAAACCATACTGGCGCAGTGGTCCATGGAATGGTGGGGTCTTTACGGGATACCATCCATGACAACTTATCTTGATAATTTGAAAGGTGGGTATGATGGGGAAGAAAATATAGATATCTATTACACGGTGTCAAGTGGTTTAGGATTTGTAATCTTTACGCTGAATTCACAAGGCCAGTATGAGGAAAAATGGTGGGATGATGAGAAGAAAAAAATGGAAAGATCACCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAAGGAACAAAGAAGAATGGAATAGACAAAACTGGACTAGTGGATGCATTAGAAGAACACGTTTGAAGTGTGAAAGGGTCAAAGATCGAAACACAAGTATAGATACAAAGGAAGATGGATTTTTGAAACTACAAATGGTTAGAGTTCCAGATTTTCCAGTAGGATTTACACCAGAAATATGCAGAAACCAATGCTTAGAGAATTGCTCTTGTGTTGCATATTCCCACGAAACTGCAATTGGTTGCATGTCCTGGACAAGGAATCTACTTGACATACAACAATTCTCAGATGGAGGACTTGATCTATATGTTCGTGTAGCCCACACTGAAATTGATGGAGGGAGAAACAGAACGATCGTCATTACAATTACAGTGATAATAGGAACTGTCTTCATTGTTACCTGTGCATATGTCATGTGGAGGACTTCTAATCACCCAGCTAAACTATGGAACTCAATTAAATCAGCAAGGAAAAGGAACATCAAAGCTTTCCTACAATTAAACAATGGTGAAACACCGGAACATCAAAACCACAAAGTAATTGCAGAACTGTCACATGTTAAACTCCAGGAGCTGTTGCTGTTTGATTTTCAAAGGGTTGCAACAGCTACAAACAACTTCCATTTGTCCAAGAAACTTGGGCAGGGTGGTTTTGGCACAGTATACAAGGGGAAACTGCAAGATGGACAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGCAATCTTGTAAAACTTTTTGGCTGTTGTATTGAAGGTGACGAAAAGATGTTGATATACGAATACTTGCCAAATAAAAGCTTGGATGTGTTAATCTTTGGTCCATCAAAAGGTAAACTCCTAGATTGGAGGAAGCGCAGTAGCATAATACAAGGAATAGCTCGAGGACTGCTATATCTTCACAGAGACTCCAGACTAAGAATTATACACAGAGATTTGAAGACAAGTAATATCTTATTAGATGAAGAGCTTAATCCAAAAATATCAAACTTTGGTATGGCTAGAATCATTGGAGGAAGTGAAGATCAGGCCAATACTAACAGGGTTGTTGGAACCTATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTATTTTCAGAGAAGTCAGATGTCTTTAGCTTTGGTGTTTTGGTTCTAGAGATTGTCAGTGGAAGAAGAAAATCAAGCTTTTATGATGATGACCGTGTTCTTAGCCTCTTGGGGTTTGCCTGGATACAATGGACGGAAGGCAACATGTCATCTCTAATAGATCCAGCAATGTATGATCCTAGTTACCATAAAGATATTTTAAGGTGCATTCAAATAGGACTTCTATGTGTACAAGAACTTGCCACAGATCGACCCACTATGGGTGCAGTGATTTCTATGCTCAACAGTGAGGTTGATTTTCTTCCTCCTCCTAGTCAACCTGCATTCATCCTGAGGCATAATCTGTTGAATTCGGTGTCTTCAAAAGAAAGTCAGAGATTCTCCTCCACCAACAATGCTAGCATTACAACTATCTGTGGAAGA 4788 0.3906 GISIDTITSSQSIKDPKTKRTNDGNFTLGFFTPQYSTNRYVGIWWKPQCTVIWVANRNQPLNDSSGIVTISEDGNLVVLNGQKQVIWSTNVRNASSNTSAKISEYGKLVLTETTTGNILWDSFQQPSNTLLPGMKLPTNRTGENVELRSWKSPSDPSVGIFSSNIVPRINIVEVLTWNETLPYWRSGPWNGAGVFKGIPTMTTYLNGFKSGDDEEDIYFTIPSGSDFFMYVLNSKGQYEETWWDYEKKEMQVSWTSRQSDCDVYGICGSFAICNAQSSPLCRCLKGFEPRNKEEWNRQNWTSGCVRSKDLQCENVKDQNTDTYTKEDGFFRLQMIKVPDFPEVSPELPDICRSQCLENCSCVAYSHDDEIGCMSWTENLIDIQQFSHGGLDLYVRTNTKIIVTITVIIGTGIIVTCAYVMWRTYNYPVRLEWKRYIKTYQRFNNGETHEDRHHKVIQELSQVKLPELLLFDFQRVATATNNFHLSNKLGQGGFGPVYKGKLQDGLEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEKMLLYEYLPNKSLDMFIFDQSKSKLLDWRRRSRIIEGIAQGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFDMTRIFGGTEDQANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYDNVHALSLLGFAWIQWKEGNILSLIDPEIYDPSHDEDILRCIHIGLLCVEELAVDRPTMATVISMLNSEVAFLRAPTQPAFILKQNMLNSVSSEESHRSCSINTISITDIHGSIHANLFFALFTLYCCYVLDVGIARDTITSSQTIKDHETLRSKDGNFTLGFFTPQNSTKRYVGIWWKSQSTVIWVANRNQPLILLELLQYLKMAILSMLFGQPMYLMHHPIQVPNFSQYGKIVLLETTTGNILWDSFQQPSDTMLPNMKLSSNIRRVTKVELTSWKSPSDPSNGSFSSSVVQRINILETILAQWSMEWWGLYGIPSMTTYLDNLKGGYDGEENIDIYYTVSSGLGFVIFTLNSQGQYEEKWWDDEKKKMERSPICSCLKGFEPRNKEEWNRQNWTSGCIRRTRLKCERVKDRNTSIDTKEDGFLKLQMVRVPDFPVGFTPEICRNQCLENCSCVAYSHETAIGCMSWTRNLLDIQQFSDGGLDLYVRVAHTEIDGGRNRTIVITITVIIGTVFIVTCAYVMWRTSNHPAKLWNSIKSARKRNIKAFLQLNNGETPEHQNHKVIAELSHVKLQELLLFDFQRVATATNNFHLSKKLGQGGFGTVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVKLFGCCIEGDEKMLIYEYLPNKSLDVLIFGPSKGKLLDWRKRSSIIQGIARGLLYLHRDSRLRIIHRDLKTSNILLDEELNPKISNFGMARIIGGSEDQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRKSSFYDDDRVLSLLGFAWIQWTEGNMSSLIDPAMYDPSYHKDILRCIQIGLLCVQELATDRPTMGAVISMLNSEVDFLPPPSQPAFILRHNLLNSVSSKESQRFSSTNNASITTICGR 1596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02500 1596 Pfam Protein tyrosine and serine/threonine kinase 483 749 IPR001245 GO:0004672|GO:0006468
Pste5g02500 1596 Pfam Protein tyrosine and serine/threonine kinase 1279 1545 IPR001245 GO:0004672|GO:0006468
Pste5g02500 1596 Pfam PAN-like domain 1107 1163 IPR003609 -
Pste5g02500 1596 Pfam PAN-like domain 324 382 IPR003609 -
Pste5g02500 1596 SMART ntp_6 324 396 IPR003609 -
Pste5g02500 1596 SMART ntp_6 1107 1177 IPR003609 -
Pste5g02500 1596 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1354 1557 - -
Pste5g02500 1596 CDD B_lectin 10 126 IPR001480 -
Pste5g02500 1596 Gene3D Transferase(Phosphotransferase) domain 1 1354 1555 - -
Pste5g02500 1596 Gene3D Transferase(Phosphotransferase) domain 1 558 761 - -
Pste5g02500 1596 CDD PAN_AP_plant 1106 1178 - -
Pste5g02500 1596 Pfam S-locus glycoprotein domain 184 290 IPR000858 GO:0048544
Pste5g02500 1596 Gene3D - 2 124 IPR036426 -
Pste5g02500 1596 SUPERFAMILY Protein kinase-like (PK-like) 1263 1580 IPR011009 -
Pste5g02500 1596 Gene3D Phosphorylase Kinase; domain 1 1238 1353 - -
Pste5g02500 1596 Gene3D Phosphorylase Kinase; domain 1 442 557 - -
Pste5g02500 1596 SMART serkin_6 482 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02500 1596 SMART serkin_6 1278 1556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02500 1596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 603 615 IPR008271 GO:0004672|GO:0006468
Pste5g02500 1596 ProSiteProfiles Bulb-type lectin domain profile. 4 123 IPR001480 -
Pste5g02500 1596 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 107 779 - -
Pste5g02500 1596 FunFam receptor-like serine/threonine-protein kinase SD1-8 1249 1353 - -
Pste5g02500 1596 CDD PAN_AP_plant 309 396 - -
Pste5g02500 1596 ProSiteProfiles PAN/Apple domain profile. 1095 1178 IPR003609 -
Pste5g02500 1596 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 123 - -
Pste5g02500 1596 FunFam Os04g0303100 protein 45 183 - -
Pste5g02500 1596 FunFam receptor-like serine/threonine-protein kinase SD1-8 453 557 - -
Pste5g02500 1596 CDD STKc_IRAK 1284 1550 - -
Pste5g02500 1596 CDD STKc_IRAK 488 754 - -
Pste5g02500 1596 Gene3D - 819 966 IPR036426 -
Pste5g02500 1596 SMART blect_4 830 939 IPR001480 -
Pste5g02500 1596 SMART blect_4 10 126 IPR001480 -
Pste5g02500 1596 ProSiteProfiles Protein kinase domain profile. 482 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02500 1596 SUPERFAMILY Protein kinase-like (PK-like) 467 789 IPR011009 -
Pste5g02500 1596 ProSitePatterns Protein kinases ATP-binding region signature. 1284 1306 IPR017441 GO:0005524
Pste5g02500 1596 ProSiteProfiles Bulb-type lectin domain profile. 824 968 IPR001480 -
Pste5g02500 1596 SUPERFAMILY alpha-D-mannose-specific plant lectins 41 156 IPR036426 -
Pste5g02500 1596 SUPERFAMILY alpha-D-mannose-specific plant lectins 862 970 IPR036426 -
Pste5g02500 1596 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 558 761 - -
Pste5g02500 1596 Pfam D-mannose binding lectin 50 151 IPR001480 -
Pste5g02500 1596 Pfam D-mannose binding lectin 870 965 IPR001480 -
Pste5g02500 1596 ProSiteProfiles PAN/Apple domain profile. 312 397 IPR003609 -
Pste5g02500 1596 ProSiteProfiles Protein kinase domain profile. 1278 1556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02500 1596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1399 1411 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02500 Pste-Chr5 17531524 17540360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02500 456 798 Receptor kinase-like Gene Family AT4G11530 55.301 1.77e-118 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste5g02500 PK_Tyr_Ser-Thr 8.2e-45 CL0016