Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02492 TTCACTGCCTCTTGTTTCTTATATGCAAGTCACAAACAGGCAGTGACAATGGGAAACATTTGTGTTGGATCAAAAACTTCAGAAGATGCAATGTTTCCCTTTGCTCTTCCGAGTTCGTTCTGGTGGCATCAGCAAACGAGCATCGAAGACACAACTGCTGTAGAGAATGTTGAAGAAAAGCCTCCACAGGTAATGAAGATGCTGAAATCAGTTTCCTCCGAGACTAATATTCCTTCGGAGGAACAAACGGCTGATGAAGTTAAGAAGCGGGCAAAAGGGCTTGAAGAAGAGTCAATTTTGAAGAGAAAAAGTGGTCACTTCAAGGAGCAGTATAATTTGGGAGAAGAGATTGGGAATGGACAATATGGAACAACATTCATTTGCACAGAGAAAGGGAGTGGGAAAAAGTATGCTTGCAAGTCCATTCCAAAAGTGAAATTGGTGACGGATGATGATGTGGAGGATGTGAGGAGGGAGATTGAGATAATGCATCACTTGGAAGGGTGTCCTAATGTGATATCAATTAAAGGGGCTTATGAGGATGCTGTTGCAGTTTATGTTGTGATGGAGTTGTGCAAAGGGGGTGAACTGTTTCAAAGGATTGTGGAAAAGGGTCATTATACAGAGAGAAAAGCAGCTACACTTGCAAGGACTATTGTTACTGTTGTAGAGGGGTGTCACTCACGTGGAGTCATGCATCGGGATCTCAAGCCTGAGAACTTTCTTTTTCTTCATCACAATGAACACTCCACACTTAAGGCCATAGATTTTGGATTGTCTATTTTCTTCAAACCAGGAGACATTTTTACGGACGTGGTTGGAAGTCCTTTTTATATCGCACCTGAGGTTCTAAAAAGACATTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGTGTAATCATATACGCTCTTTTAAGCGGAGCACTTCCATTTTGGGGTGAATCGGAGAAAGAGATATTTAGAGATGTTTTGCATGGTGATCTTGATCTCTCTTCAGATCCTTGGCCGAATATATCTGAAAGTGCTAAAGACTTGGTTAGGAAGATGCTTGATAGAGATCCTAGAAAACGGATAACAGCACACGAAGTTCTTCGTCACCCTTGGATTCAGGTTGGAGTTGCTCCAAACAAGCCTTTTGATTCTGCTGTTATTGCAGAGAATCTCTCAGAGGAAGAAATTTCTGAACTGAAAGCAATCTTTAAGATGATAGACACAGAAAAAAATGGTCAAATTACTTTAGAAAAGCTCAAGGCAGGATTGAAAATGCTTGATGCTAATCTCAGTGAACCAGAAATTTTGGATCTAATGAAAGCTGCAGATGTTGATAAAAATGGGACAATTGACTACCGAGAATTCATAGCCGCTACATTGCATTTAAACAAAGTTGACAGAGAAGATCATTTAGTTGCAGCATTTTCATATTTTGATAGAAATGGAAGTGGCTACTTCACTAAAGATGAACTTCAAAAAGCTTTCGAAGAGTTTGGCATGGAGGATGTCTGTTTAGAGGAAATGATCCAAGAAGTTGATCAGAATAATTATGCCTCTGAGACTCTGAGGAGTGTAGCCAAACTTTGTGGGAAAAGGCTTGATTGCTATTGTTGCATTGATGTGTTTCAATATGATCTCCAATCTGATGGACTTCATGCAGATTGCATATTGAAAGATATCTTTAAATTTGCTAAGAACCCCAACCAGAAACAAAAACAGGATGGTCGAATAGACTACAATGAATTCGTTGCTATGATGCAGAGAGGCAGTGCAGATTTAGGTAAAAACGGTGTGAAGGGTCGCACTGATTTTATCATTGGATATAGGGAGGCAGTATCAGTGTGCTAAGAAAAAGTGAAAATGATTTTTATAGTTTTTTCCTCGCTGGTGAAATTAATTGTTCTTGAAAAAGCTTAGTTAGGG 1914 0.3986 FTASCFLYASHKQAVTMGNICVGSKTSEDAMFPFALPSSFWWHQQTSIEDTTAVENVEEKPPQVMKMLKSVSSETNIPSEEQTADEVKKRAKGLEEESILKRKSGHFKEQYNLGEEIGNGQYGTTFICTEKGSGKKYACKSIPKVKLVTDDDVEDVRREIEIMHHLEGCPNVISIKGAYEDAVAVYVVMELCKGGELFQRIVEKGHYTERKAATLARTIVTVVEGCHSRGVMHRDLKPENFLFLHHNEHSTLKAIDFGLSIFFKPGDIFTDVVGSPFYIAPEVLKRHYGPEADVWSAGVIIYALLSGALPFWGESEKEIFRDVLHGDLDLSSDPWPNISESAKDLVRKMLDRDPRKRITAHEVLRHPWIQVGVAPNKPFDSAVIAENLSEEEISELKAIFKMIDTEKNGQITLEKLKAGLKMLDANLSEPEILDLMKAADVDKNGTIDYREFIAATLHLNKVDREDHLVAAFSYFDRNGSGYFTKDELQKAFEEFGMEDVCLEEMIQEVDQNNYASETLRSVAKLCGKRLDCYCCIDVFQYDLQSDGLHADCILKDIFKFAKNPNQKQKQDGRIDYNEFVAMMQRGSADLGKNGVKGRTDFIIGYREAVSVC 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02492 612 Coils Coil 77 97 - -
Pste5g02492 612 ProSiteProfiles EF-hand calcium-binding domain profile. 427 462 IPR002048 GO:0005509
Pste5g02492 612 ProSitePatterns EF-hand calcium-binding domain. 440 452 IPR018247 -
Pste5g02492 612 SMART efh_1 395 423 IPR002048 GO:0005509
Pste5g02492 612 SMART efh_1 467 495 IPR002048 GO:0005509
Pste5g02492 612 SMART efh_1 431 459 IPR002048 GO:0005509
Pste5g02492 612 SMART efh_1 553 586 IPR002048 GO:0005509
Pste5g02492 612 Gene3D Phosphorylase Kinase; domain 1 113 196 - -
Pste5g02492 612 SMART serkin_6 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02492 612 Gene3D Transferase(Phosphotransferase) domain 1 197 374 - -
Pste5g02492 612 ProSiteProfiles EF-hand calcium-binding domain profile. 463 498 IPR002048 GO:0005509
Pste5g02492 612 Pfam EF-hand domain 469 494 IPR002048 GO:0005509
Pste5g02492 612 Gene3D - 461 602 - -
Pste5g02492 612 SUPERFAMILY Protein kinase-like (PK-like) 109 370 IPR011009 -
Pste5g02492 612 Gene3D - 375 460 - -
Pste5g02492 612 SUPERFAMILY EF-hand 381 513 IPR011992 -
Pste5g02492 612 CDD STKc_CAMK 110 368 - -
Pste5g02492 612 ProSiteProfiles EF-hand calcium-binding domain profile. 391 426 IPR002048 GO:0005509
Pste5g02492 612 Pfam EF-hand domain pair 395 456 IPR002048 GO:0005509
Pste5g02492 612 CDD EFh 395 455 IPR002048 GO:0005509
Pste5g02492 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pste5g02492 612 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Pste5g02492 612 PANTHER SERINE/THREONINE-PROTEIN KINASE 97 513 - -
Pste5g02492 612 Pfam Protein kinase domain 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02492 612 FunFam Calmodulin 1 385 517 - -
Pste5g02492 612 ProSiteProfiles Protein kinase domain profile. 111 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02492 612 FunFam Calcium-dependent protein kinase 1 113 196 - -
Pste5g02492 612 FunFam calcium-dependent protein kinase 1 197 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02492 Pste-Chr5 17466157 17473038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02492 91 513 EF-hand Containing Proteins AT5G04870 69.144 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste5g02492 Pkinase 4.8e-72 CL0016