Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02486 TTTAGAGAGATCGCATATATGGAAAGACACATAAATTTACTCTTTTTGCTGCGTTTGAAATTCATTTCTTAAATTAAGAAGGCTTGGACCCCCATCATTTAGCACTTGAGAATCATCACCAAATTAAAGAGATGTTTCTTTCAAGACTTGAAGAGGGTAAGTTAAACACCAACACTACAACTCAGAAGTTGGTGATCAACAAAGGAGGAACACAAGCTGCAGCAGGAGTATCCTCTTCTTCAAGGAACCCTTTCCCTCCTCTACCTACTCATAAGAGAGGCAAATTACTGGCTGAAGATGTGATGTTAACTAGTGGTGTGATTAAAAATTCAGAAGATAGCGATGAAGATGTGTTCACGGTTCCAGACATGGAAGCTGCACCAAGTGTTGATTCTGCACTCTCAAATCCAAATAGTAATATCGTTAAACAAAGTAAGATCACAGATCCACAGCTTCAATGTGGAAAGCGCCCCCGAGGAAGAAACTCCCTAGACAAGGAATATAGACGCCTCAAGAGATTGTTAAGAAACAGGGTTTCTGCTCAACAAGCCCGTGAAAGAAAAAAGGTTTATGTTAATGACTTGGAATCAAGAGATAAAGAATTGGAAGAAGAGAATACAAAGCTAGAAGAGCGTATTTCTACTTTGATCAATGAGAACACCATGCTCCGCAAGGTTCTTATGAATACGAGGCCGAAGGTTGATGAGAGCAATGAAGCATAGATCATGTGTTCAGTTAAATGAACAATTATCAGACTAATGTAAAAGTTTCCTAGCAAACTCAGGCTTCTAGGATATGTATGGGTGTTTCTCTCCATATATATATATATATAGGTAGAAAGGGAG 845 0.387 MFLSRLEEGKLNTNTTTQKLVINKGGTQAAAGVSSSSRNPFPPLPTHKRGKLLAEDVMLTSGVIKNSEDSDEDVFTVPDMEAAPSVDSALSNPNSNIVKQSKITDPQLQCGKRPRGRNSLDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRDKELEEENTKLEERISTLINENTMLRKVLMNTRPKVDESNEA 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02486 196 SMART brlzneu 121 185 IPR004827 GO:0003700|GO:0006355
Pste5g02486 196 Pfam bZIP transcription factor 122 181 IPR004827 GO:0003700|GO:0006355
Pste5g02486 196 Coils Coil 148 175 - -
Pste5g02486 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Pste5g02486 196 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 26 193 IPR044280 GO:0000981|GO:0045944
Pste5g02486 196 MobiDBLite consensus disorder prediction 29 49 - -
Pste5g02486 196 Coils Coil 120 140 - -
Pste5g02486 196 Gene3D Single helix bin 144 185 - -
Pste5g02486 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 123 186 IPR004827 GO:0003700|GO:0006355
Pste5g02486 196 SUPERFAMILY Leucine zipper domain 124 184 IPR046347 GO:0003700|GO:0006355
Pste5g02486 196 CDD bZIP_HY5-like 135 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02486 Pste-Chr5 17421103 17423594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02486 83 194 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 60.714 8.14e-38 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste5g02486 bZIP_1 1.7e-12 CL0018