Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02483 GAAAAGGGAGTTAAAGGGAGCGTGTATTCTATGACCCGTTTTTCCGAGAGGCTCCGTTTGCGTTGGTTGCTTCCGAAACCGACCCGTTTTCTCGCTCTTGTTTCTCTCTCCAAGTCCCTCGCTCGATTCCTACTCTCCCAAACCCTACCTTTCCTCGCCATGGACAATATCTTCTCCGATTACATCTCCGACGACTTCGATTCCTCCTCCTACCGTCCCCACCGCCGCTTTCTCCAAGACGACCACCGTGATTTCGGTGCCCTCGAGAGGGTCTACCTCCTCCCCTACAGGTGGTGGGCGGAAGCGGAAGTAGAATGTGATCGTGGAGAGGGTGTACTTTATACGGTGTCGTCTAATTACGATTCCGACTCCGAGATTTTGCTTCATCTGAAGAAGGAAGAGGAGCGTCACAAGATTGGGGTTTCTGCTCGTCACTATGTTTTGGTTACCGAGGGAGTTTGGTTGCGTACTCTTAAACGGTATAATGATTTTAATAATGGATTGAAAGACTTTGGAAGGCTCTCCTATACAGAAGACTGTTTGCCAGATTTGTTCCCTTTGCAAGTTAAGATATTTGTTTCATGGGAAACCAATTCTCTGGTAGCAAAGATAAGCCAAAAGGAAAATGCGGCAGACTTCTATGAGAAAGCTTGTGAAATTTTCAATCCTGCAAATAACCCTGTGCATATTTGGGACTTTTCAGGGCAGACAACCCAGTTCTTCTTGAATGACAAATCTAGGTTGCCAGATGATTCTCCTGGTCAACCTGGAAAAGAGGTTGTTTTGGAGTTACAAGTTCATGGACTTCCAGATTCTACGAAGGGTAATGGGGGCAATGAGATGATTTTAGATAGGTCTAACATGGAATGTTCTCATAGTGGCTCTGTTTTAATGAATGGCGGCACTGACAATGTGATCCCGTGCATAACAGAAACCAACTATTTTCGAGGCAGTAGCTGTAGAACAATTCGATCATTGGGCTTGACAGGATTACAGAATCTTGGAAATACTTGTTTTATGAATAGTGCCATTCAGTGTTTGGCTCATACTCCAAAGCTTGTTGATTTTTTCCTTGGAGATTATCGTAAAGAGATAAATTATGAAAATCCGTTAGGAATGAATGGAGAACTTGCTCTAGCTTTTGGAGACTTGCTTAGAAAGCTGTGGGTTCCCGGAGCAATGCCCATTGCACCAAGAACATTCAAAATGAAATTAGCTAATTTTGCTCCTCAGTTTAGTGGTTATAGTCAGCATGACTCTCAAGAACTTCTTGCTTTTTTGTTGGATGGATTGCATGAAGATCTTAATCGTGTAAAACGCAAGCCATATCATGAAGTTAAGGATGCAGATGGTCGTCCAGATGAAGAAGTGGCAGAGGAGTATTGGCGAAATCACCTTGCTCGCAATGACTCCATAGTAGTTGATCTGTGCCAAGGTCAGTTTCGGTCAACATTGGTTTGCCCTATTTGCAAAAAGGTTTCTATCACATTTGACCCTTTTATGTATCTATCTCTGCCTTTACCTTCTACTTCGATACGGACCATGACTTTGACGGTCATTAGCACTGATGGGATTACATTGCCATCTACAATTACGGTAACAGTGCCTGAATGTGGAACACTTAAGGATCTTATTGGGGCCTTGAGTGCTTCTTGTTCTCTTAGAGATGATGAAACCCTCTTTGTGGCTGAGATATACAAGAATAAAATTTTTCGAGTATATGAGGATCTATCTGATTCATTAGTTGATATTAGAGATCAAGACACAGTTGTTGCTTACCGATTGCAGAAGTATAATGAAGCTAGTCCCTTGGTTGCTTTTGTGCATGAACATATGGAGGAAAGTTTTGGGAAGGAAAGGTTTGAAAACAGGTCGTTTGGTTTCCCCCTCGTTACAAGGTTGTCCAATATTTCTTGTGGATATGATGCTCAAAGGGAGTTTCTGAAGTTAATCAATCCATTTTTGACACACATTGAAGATGTATCAAATGAGTATAAGAATGGTGGTGCTAATAAATGTGAAGATGATGAATTGGGTGATACTACTAACTCTGCAGAAATAGGAAATGATGAAAACTCAAACAAGGGAACGGAGGAGGATGACATACATTTGTCAACTGATTTTGAATTCTACTTTCATGGGAAGAAGATAATATCGAATGAACCATTGCTAGTCACATTGTTGCCCAGAAAGCCACCAGAAGTAGTTGTCTTGTGGTCAGATAAGATGCTTAAAGTGTATAATACATACCTGCTTGATTCATTGCCTCAGGTTTTCAAGTCTCAGCTATTCACCAAGAGAACACAAGAATCGGTTTCTATTTACAAGTGTCTGGAAGCTTTCTTGAAAGAGGAACCTCTTGGACCAGAAGACATGTACTGTCCTAAGTGCAAAAAACCTCAGCAAGCAACTAAAAAACTAGATCTTTGGAGATTGCCTGAAATCCTTGTTGTTCATTTGAAGAGGTTCTCATACAGCCGATTCTTCAAGAACAAACTGGATACGTTTGTTGATTTTCCAATTAATGATCTGGACTTGTCAACATATGTAGCCCATGGAAATAGTCAGTCTTCCAACCGTTATGTGCTGTATGCAATTAGTTGTCATTATGGAGGGTTAGGAGGAGGTCACTATACAGCATTTGTCCGTTATGGCGTTAAGAAATGGTATGATTTTGATGACAGCAGGGTTGAATCTGCTGGTGAGGACATGATCAAGTCTCCTGCCGCGTATGTTCTTTTCTACAGAAAAGAGTAGATGAAAGTTTTAGATGCAATTGTGTAATTAGTCATAGCAACAGGGAATGCTTGAGGCTTTTCAGACCTTTGCCTATACATACGGTTGTCTGATTTCCTCAAAATTGCTGCTTAAACAGTACTGATTGGGTTTTACTGAGACAAGTGAGAGAAATGCAAAGAATTGAATATTGTACAGCTTTTAGAAGCTACAGATAAAAGAGAGTAGCACTTAAATTTTTAAACCCGGAGGATAGATATGTTTTACATGTACATATGCATCCTGAAATTATTTAACCAATTTTTTAAGCTGATGTAGCTTGTGTTCATGTGTTCATTTTAATCAACGATATATATGGAAGATTACCC 3104 0.4066 EKGVKGSVYSMTRFSERLRLRWLLPKPTRFLALVSLSKSLARFLLSQTLPFLAMDNIFSDYISDDFDSSSYRPHRRFLQDDHRDFGALERVYLLPYRWWAEAEVECDRGEGVLYTVSSNYDSDSEILLHLKKEEERHKIGVSARHYVLVTEGVWLRTLKRYNDFNNGLKDFGRLSYTEDCLPDLFPLQVKIFVSWETNSLVAKISQKENAADFYEKACEIFNPANNPVHIWDFSGQTTQFFLNDKSRLPDDSPGQPGKEVVLELQVHGLPDSTKGNGGNEMILDRSNMECSHSGSVLMNGGTDNVIPCITETNYFRGSSCRTIRSLGLTGLQNLGNTCFMNSAIQCLAHTPKLVDFFLGDYRKEINYENPLGMNGELALAFGDLLRKLWVPGAMPIAPRTFKMKLANFAPQFSGYSQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDADGRPDEEVAEEYWRNHLARNDSIVVDLCQGQFRSTLVCPICKKVSITFDPFMYLSLPLPSTSIRTMTLTVISTDGITLPSTITVTVPECGTLKDLIGALSASCSLRDDETLFVAEIYKNKIFRVYEDLSDSLVDIRDQDTVVAYRLQKYNEASPLVAFVHEHMEESFGKERFENRSFGFPLVTRLSNISCGYDAQREFLKLINPFLTHIEDVSNEYKNGGANKCEDDELGDTTNSAEIGNDENSNKGTEEDDIHLSTDFEFYFHGKKIISNEPLLVTLLPRKPPEVVVLWSDKMLKVYNTYLLDSLPQVFKSQLFTKRTQESVSIYKCLEAFLKEEPLGPEDMYCPKCKKPQQATKKLDLWRLPEILVVHLKRFSYSRFFKNKLDTFVDFPINDLDLSTYVAHGNSQSSNRYVLYAISCHYGGLGGGHYTAFVRYGVKKWYDFDDSRVESAGEDMIKSPAAYVLFYRKE 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02483 918 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 861 878 IPR018200 GO:0004843|GO:0006511
Pste5g02483 918 SUPERFAMILY Cysteine proteinases 327 917 IPR038765 -
Pste5g02483 918 MobiDBLite consensus disorder prediction 669 699 - -
Pste5g02483 918 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 329 918 IPR028889 -
Pste5g02483 918 Pfam Ubiquitin carboxyl-terminal hydrolase 329 915 IPR001394 GO:0004843|GO:0016579
Pste5g02483 918 CDD Peptidase_C19R 746 916 - -
Pste5g02483 918 Gene3D Cysteine proteinases 610 918 - -
Pste5g02483 918 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 330 345 IPR018200 GO:0004843|GO:0006511
Pste5g02483 918 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 283 917 - -
Pste5g02483 918 Gene3D Cysteine proteinases 317 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02483 Pste-Chr5 17406160 17414554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02483 763 917 Miscellaneous Gene Families AT4G31670 33.962 7.66e-18 86.7