Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02454 ATGAGCTGCTTTTCATGTTTTCCGTTGAACGAAAAGAAAGTGGCAAAGAGGCCTAACAGCGGAGAGAGGATACAACAGCCTACTAATCGATCTCAAATGGAAGCAGTCCAAACATCTCAGCCAGAGTCAGACAATCATAATGGGAACAATAACATTGCTACACAAACATTCACCTTGAGGGAATTGGCTGCTATCACAAAGAACTTCAATCAGGAATGCCTAATAGGTGAAGGTGGTTTTAGGAGGGTTTATAAAGGAAGACTTGAAGAAACAAACCAGGAAGTAGCAGTGAAGCAACTTGATAGGAATGGATTACAAGGGAATAGAGAGTTTCTTGTTGAAGTTTTAATGTTGGGCATCTTGCACCATCAAAATCTAGTGAATCTAATTGGATATTGTGCTGACGGAGATCAGAGATTATTGGTGTTTGAGTACATGCCATTGGGATCTCTTGAGGACCATCTGCCTGGTCTTCATCCACAACAAAAACCGCTAGATTGGTTTACCAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCATAACAAGGCCAATCCTCCAGTCATCTACCGTAACTTAAAATCCTCTAAGATCTTGCTGGACGAAGATTTTAATGCAAAACTCTCAGATTTTGGCCTAGCAAAGTTAGGTCCTATAGGAGACAAGACTCATGTCTCTACAAGAGTAGTGGGTACTAATGGATACTGTGACCCTGAGTATCAAAGAAGTGGTTGTCTAACAGTAAAATCAGATGTATACAGCTTTGGAGTTGTTTTGCTTGAATTGATCACGGGAAGGAGAGCCATTGATGTCACAAAACAAACGCAGGAGCAAAATCTAGCATATCCAGTATTCAAGGACCCTAACAGATACACAGAATTAGCAGACCCCCTTCTTCAAGGAAACTTTCCAATGAGATCTCTGCATCAAGCAGTGGAAGTAGCAGCCATGTGCCTGAATGAGGAGCCATCAGTGAGGCCATTGATCAGTGATGTTGTCACTGCTCTTAGTTTCCTTAGGACAAATTCAGGGAGTCAAGACCTTGCAGGAATTGGACCCATTGACATTCCCTCTTCACCACAAGAAGCCAATGGAATGCTTCTGAACCATTGAATGGGGCAGAAACACTATGAGCAAAATGCAAAACACCACTGCATGAAAGTTCTTCCTCTTTGTAACTCCACTACAATCATTTTCATATATTTGTTGATTTTCGCTATACAAAAGGATATCAAGATTGAGAACTCAAGGTACTTTGTATATGAGAAAAAATCTTGAGCACCATTACAAGTGCATGTTTTTAGATGACACACTACAAGAGTTGGTATTGTATGATTCGCAGCTCATATGTAAACTTTTGAATGCTAGTATCATCAATATGAAGAAACTTTTTAT 1407 0.4001 MSCFSCFPLNEKKVAKRPNSGERIQQPTNRSQMEAVQTSQPESDNHNGNNNIATQTFTLRELAAITKNFNQECLIGEGGFRRVYKGRLEETNQEVAVKQLDRNGLQGNREFLVEVLMLGILHHQNLVNLIGYCADGDQRLLVFEYMPLGSLEDHLPGLHPQQKPLDWFTRMKIALDAAKGLEYLHNKANPPVIYRNLKSSKILLDEDFNAKLSDFGLAKLGPIGDKTHVSTRVVGTNGYCDPEYQRSGCLTVKSDVYSFGVVLLELITGRRAIDVTKQTQEQNLAYPVFKDPNRYTELADPLLQGNFPMRSLHQAVEVAAMCLNEEPSVRPLISDVVTALSFLRTNSGSQDLAGIGPIDIPSSPQEANGMLLNH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02454 374 Gene3D Transferase(Phosphotransferase) domain 1 146 353 - -
Pste5g02454 374 CDD STKc_IRAK 75 340 - -
Pste5g02454 374 MobiDBLite consensus disorder prediction 354 374 - -
Pste5g02454 374 MobiDBLite consensus disorder prediction 15 51 - -
Pste5g02454 374 MobiDBLite consensus disorder prediction 21 51 - -
Pste5g02454 374 ProSiteProfiles Protein kinase domain profile. 69 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02454 374 Pfam Protein kinase domain 71 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02454 374 FunFam Serine/threonine-protein kinase PBS1 146 354 - -
Pste5g02454 374 FunFam probable serine/threonine-protein kinase RLCKVII 41 145 - -
Pste5g02454 374 Gene3D Phosphorylase Kinase; domain 1 38 145 - -
Pste5g02454 374 SUPERFAMILY Protein kinase-like (PK-like) 49 343 IPR011009 -
Pste5g02454 374 PANTHER OS07G0668900 PROTEIN 3 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02454 Pste-Chr5 17076057 17078780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02454 1 361 Glycoside Hydrolase AT3G07070 65.241 1.31e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste5g02454 Pkinase 1.4e-42 CL0016