Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02453 ATGAAGATGGCTTGTTCTTGGTCTTTGTCTGTCTTACTGTTTCTTCTCCTACCCTTTTTCTCTTTTCACAGTTCACATTCTGCATCTTTATCTTCACTCACCAAGGGTTCATCCCTTTCAGTAGAAAAGCCAGAAGACGTTATTCTCTCCCCAAACAGAAGCTTCTCTGCTGGCTTTGTGGCCATTGGTGAAAACGCATACTCCTTCGCCATTTGGTTCACTCAAACTGGTTCTCAAAACGACCCCACAGTGGTGTGGATGGCAAACCGCGAAAGCCCCGTTAACGGAAAACGCTCGAAGCTTTCTCTCTCACAAACCGGTAACCTTGTCTTAGATGACGCTGGTCAACACAACGTGTGGTCTTCCAACACTGAATCATCAGCCCCAACAGAGTTGCATCTCAAAGATGATGGCAACCTCGTGTTGCGTGAGCTCCAAGGCACTGGCACTGTTTTATGGCAAAGTTTTGATTTTCCCACTGACACACTCCTTCCGGGTCAACCTCTCACCAGACGCACACAACTTGTGTCTGCAAGAAGCGACAGTAACCACTCCTCTGGTTTCTACAAGATGTTCTTCGACGATGACAACATTCTTCGTCTTCTCTACGATGGCCCTGATGTTTCCAGCGTTTACTGGCCTTATCCATGGCTTCTAAGCTGGGATGCTGGAAGGACTACTTATAATAGCAGCAGATTCGCTGCGTTGGATTTATTTGGAAGATTCGCTTCATCGGATTATTTTTCTTTTATAACCTCTGATTATGGCACTGTGAAGCTCAGAAGATTGAAACTTGATTCTGATGGTAACCTCAGAGTGTATAGTCTGCATGATGACGTGTCACATCAGTGGCATGTCACGTGGCTGGCTAGACCTGATCCCTGCAATATCCATGGGATTTGTGGAGCTAACAGCGTGTGTAGTTATGATCCTCAAAATGGAAGAAAGTGCTCTTGTCTTGCTGGGCATAGAGTGAAGAACCATAGAGATTGGACTTATGGGTGTGAACCTGTGTTTGAGATCACTTGCAATACAAGTGACTCTACGTTCTTAGAGTTGCAAGGTGTTGAGCTTTGTGGATATGATTCTAATGTTATTGAATCTAATACTTCTAGCCATTGTGAGAATTTGTGCTTAAAAGACTGTAATTGTAAGGGGTTTCAGTACTCTTACAATGATGGGAAGAATGTTTACAAGTGCTATACCAAGACACAACTGCTGAATGGGCGGCGATCACCGAGTTTCAAAGGAACAATTTACTTGAGAGTGCCTAGAAATCATAGCCATTTTCTGGGGGAAGAATCCTTTGTTGCAATTGAGCATGTTTGTGCTGTAGAGATTCCTAGAGTGTATGTTGGAGATCATGCAAGCCGGGTTGTGAGGTTTTTTCTTTGGGTTGCTGTTGCTGTTGGTGCTTTTGAATCGGTTTGCATTTTTGTGGTGTGGCTTTTCATTGTTCGAACAAGCGGAAAGTCTTCTAAAGATCAACAGGGCTACAATTTTTTGGCAGACAGATTCAGAAAATATAGTTATGCTGAGTTAAAGAAGGCCACAAAGGGGTTCAGTGAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGCATTTTATCAGATCAAAGACATGCAGCAATTAAGAGATTGAATGAGGCTAAACAAGGAGAAGGGGAATTCCTTGCTGAAGTGAACATCATTGGAAGGCTGAACCACATGAACTTGATTGAAATGTGGGGCTATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCACAAAATCTCACATCCAACACACTTGATTGGAGTAAGAGATATGACATTGCTCTTGGAACAGCAAGAGGTCTAGCATATCTGCATGAGGAATGCTTGGAGTGGATATTGCACTGTGATATAAAGCCCCAAAACATACTTCTTGATGCTACTTATCAACCCAAGGTGGCAGATTTTGGCTTGTCCAAGCTGCTAAACAGAAACAACCTCAACAATTCAAGTTTTTCAATGATAAGAGGAACAAGAGGATATATGGCACCTGAGTGGGTTCTGAACTTAGCAATCACCTCAAAGGTTGATGTATACAGCTATGGAATTGTTCTATTGGAGATGATAACTGGAAAGAGCCCAACAACTGGTGTCCAAAACATTGATGGAGAAGACTCATACAATGGAAGGCTAGTAACATGGGTGAGAGAGAAAAGGAGTGCCACAACTTGGCTAGACGACATAATTGATCCTGCAATTAAAACAAATTATGATGAATGCAAAATGGAGCTTTTGGCTAAAGTGGCTTTGGACTGTGTAGAAGAAGACAAAGACATAAGGCCAACCATGAGCCAAGTGATCATCGAAACTGGTTCCTCACTTACGGTGTTCAAAGTTTGA 2406 0.4298 MKMACSWSLSVLLFLLLPFFSFHSSHSASLSSLTKGSSLSVEKPEDVILSPNRSFSAGFVAIGENAYSFAIWFTQTGSQNDPTVVWMANRESPVNGKRSKLSLSQTGNLVLDDAGQHNVWSSNTESSAPTELHLKDDGNLVLRELQGTGTVLWQSFDFPTDTLLPGQPLTRRTQLVSARSDSNHSSGFYKMFFDDDNILRLLYDGPDVSSVYWPYPWLLSWDAGRTTYNSSRFAALDLFGRFASSDYFSFITSDYGTVKLRRLKLDSDGNLRVYSLHDDVSHQWHVTWLARPDPCNIHGICGANSVCSYDPQNGRKCSCLAGHRVKNHRDWTYGCEPVFEITCNTSDSTFLELQGVELCGYDSNVIESNTSSHCENLCLKDCNCKGFQYSYNDGKNVYKCYTKTQLLNGRRSPSFKGTIYLRVPRNHSHFLGEESFVAIEHVCAVEIPRVYVGDHASRVVRFFLWVAVAVGAFESVCIFVVWLFIVRTSGKSSKDQQGYNFLADRFRKYSYAELKKATKGFSEEIGRGAGGVVYKGILSDQRHAAIKRLNEAKQGEGEFLAEVNIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAQNLTSNTLDWSKRYDIALGTARGLAYLHEECLEWILHCDIKPQNILLDATYQPKVADFGLSKLLNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVLLEMITGKSPTTGVQNIDGEDSYNGRLVTWVREKRSATTWLDDIIDPAIKTNYDECKMELLAKVALDCVEEDKDIRPTMSQVIIETGSSLTVFKV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02453 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pste5g02453 801 Gene3D Hepatocyte Growth Factor 352 419 - -
Pste5g02453 801 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Pste5g02453 801 ProSiteProfiles PAN/Apple domain profile. 343 424 IPR003609 -
Pste5g02453 801 Gene3D - 26 157 IPR036426 -
Pste5g02453 801 ProSiteProfiles Protein kinase domain profile. 519 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02453 801 SMART ntp_6 345 423 IPR003609 -
Pste5g02453 801 Pfam S-locus glycoprotein domain 244 326 IPR000858 GO:0048544
Pste5g02453 801 Pfam Protein kinase domain 522 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02453 801 Pfam PAN-like domain 343 406 IPR003609 -
Pste5g02453 801 PIRSF SRK 1 799 IPR024171 GO:0004674
Pste5g02453 801 SUPERFAMILY Protein kinase-like (PK-like) 496 789 IPR011009 -
Pste5g02453 801 CDD STKc_IRAK 525 789 - -
Pste5g02453 801 FunFam S-receptor-like serine/threonine-protein kinase 488 593 - -
Pste5g02453 801 PANTHER OS07G0415500 PROTEIN 8 789 - -
Pste5g02453 801 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 594 799 - -
Pste5g02453 801 SMART blect_4 39 159 IPR001480 -
Pste5g02453 801 SMART serkin_6 519 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02453 801 Gene3D Phosphorylase Kinase; domain 1 485 593 - -
Pste5g02453 801 CDD PAN_AP_plant 339 424 - -
Pste5g02453 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 176 IPR036426 -
Pste5g02453 801 CDD B_lectin 48 159 IPR001480 -
Pste5g02453 801 FunFam Putative receptor protein kinase ZmPK1 27 158 - -
Pste5g02453 801 ProSiteProfiles Bulb-type lectin domain profile. 24 155 IPR001480 -
Pste5g02453 801 Gene3D Transferase(Phosphotransferase) domain 1 594 797 - -
Pste5g02453 801 Pfam D-mannose binding lectin 83 173 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02453 Pste-Chr5 17067659 17075362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02453 509 789 Trihelix Transcription Factor Family AT5G38560 42.414 1.15e-66 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste5g02453 Pkinase 1.1e-53 CL0016