Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02448 ATGAAATTCTCCTTTCCCTTGCAGTTCAGAAACGATCATGAGCCACGTGCGCACCCCAATTTCCCTCACTCCAGTGAAGTAACAACCTATTTTACCACAAAACCGATGGCGACATACTTTCATCATGGTAACTCAGAAATCCAATCAGGTGGCGCCGACGGACTCCAAACACTTGTCCTCATGAACCCGGGCTACATCCACTACTCAGACGCGACCCCGCAGCCCCAACCCTCACACGCCGCCGGCAACCTCGTGTTCCTCAACCCTGCAGTCGGCAACAACAGCTCCTTCAACCCCCACGCGCCGCCCTCTCACACCCAACAATTCGTTGGAATCCCTCTCTCTGCTTCCCAAGACCTCAACCACCACTCTTTGCACGCGCAGCACGACGTCTCGGCCCTGCATGGCTTCCTGCCGCGCATGCAGTACAATCCCTGGAACACGCTGGACCCCACCTCGGCGGCGCGTGACACCCCACGCGCGCAGCAGGGGCTGTCCCTGGGGTTGGGGTCGTTCCGGGATGGTCAGGCACCGGCCATGTCCGGCGATGACCTCCGCGTGTCTGGTGGGTCGCCGTCGTCGGCTTCTGGGGTTACCAATAATGGAGCTTCAGGCATTCAGAGCGTGCTTTTGAGCTCAAAGTATTTAAAGGCAGCGCATGAGCTCCTAGAAGAGGTTGTGAATGTTAACAATGGTATTGGCGCTGAGTTGGGAAAAAAGTGTGGTGGACAGACCAAGGTGATTGGAGAATCATCTGCAGTAGGTAGTGGAGATGCTTCAGTTGTAGGGGAAAGGAACGGAAAGTGCAGCTCTGAACTATCAACCGCAGAAAGACAAGAAGTTCAGATGAAGAAAGCAAAGCTAATCGGCATGCTTGATGAGGTGGAACAAAGGTACAGGCAGTATCACCAGCAGATGGAAATCGTGGTTTCATCGTTTGAGCAAGCTGCGGGGATTGGTTCTGCAAGGACTTACACTGCCCTTGCATTACAAACAATCTCTAAGCAATTTCGTTGTTTGAAAGATGCGATTGCAGGGCAGGTCCGAGCTGCTAATAAGAGCTTAGGAGAAGAGGATTTTGGAGGGAAAATGGAAGGCTCGAGGCTCAAATATGTTGACCATCATCTTCGGCAACAGCGAGCTCTCCAACAATTGGGAATGATCCAGCACAATGCTTGGAGACCCCAGAGAGGCTTGCCTGAAAGATCTGTTTCTGTTCTTCGTGCTTGGCTCTTCGAACATTTCCTCCACCCGTAA 1257 0.529 MKFSFPLQFRNDHEPRAHPNFPHSSEVTTYFTTKPMATYFHHGNSEIQSGGADGLQTLVLMNPGYIHYSDATPQPQPSHAAGNLVFLNPAVGNNSSFNPHAPPSHTQQFVGIPLSASQDLNHHSLHAQHDVSALHGFLPRMQYNPWNTLDPTSAARDTPRAQQGLSLGLGSFRDGQAPAMSGDDLRVSGGSPSSASGVTNNGASGIQSVLLSSKYLKAAHELLEEVVNVNNGIGAELGKKCGGQTKVIGESSAVGSGDASVVGERNGKCSSELSTAERQEVQMKKAKLIGMLDEVEQRYRQYHQQMEIVVSSFEQAAGIGSARTYTALALQTISKQFRCLKDAIAGQVRAANKSLGEEDFGGKMEGSRLKYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02448 418 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 115 418 - -
Pste5g02448 418 MobiDBLite consensus disorder prediction 165 201 - -
Pste5g02448 418 SMART prehox3 204 346 IPR006563 -
Pste5g02448 418 MobiDBLite consensus disorder prediction 187 201 - -
Pste5g02448 418 Pfam Associated with HOX 209 345 IPR006563 -
Pste5g02448 418 Coils Coil 278 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02448 Pste-Chr5 17022078 17024115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02448 36 418 Homeobox Transcription Factor Family AT2G35940 52.668 6.33e-119 359
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02448 5 17022078 17024115 Pste5g02448 5 17022078 17024115 ECH
Pste5g02448 5 17022078 17024115 Pste4g02661 4 18831690 18842618 PCT