Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02426 ATGGCAGATGAGGTGAAGATAGCCAAAGTTGGAGAAAGCCAAAGAGAAGGTTCATCAAGAGTTTTTCCATGTCTATTCTGTTCAAGAAAGTTTTACAGCTCTCAAGCTTTAGGAGGACACCAAAATGCTCACAAGAAAGAAAGAACAGCTGCAAGGAAGGCCAAGAGGGCTTCTGAATACTCAACTGTTTCCTTCCCTTCCCCATTGCCAACCCCTATGGTTTTTGCCCCAACCCATATAGAAATTTTTAATCCTTCGGTGTTCATCACTGCCCATGCACCAAAACTCCGTTATCTCCCAAGCCATCAGATTTCAGAACAATTTGGATCAAATTGTACACCTAGATTTGGCAATGCATTATTTTCTGGGGGAAGTTCAAAAAAAGGGTTTTGTGATGAAGGAAAGAACACTAACTTGAGCTGGGGCGGCACATCTCAACATATACAACTGATAAAGTATAGACTGGAAATGAGAAGGCGCATTTTTCTGAGAGCTAGGGAACTGCGGGACTAG 513 0.425 MADEVKIAKVGESQREGSSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRASEYSTVSFPSPLPTPMVFAPTHIEIFNPSVFITAHAPKLRYLPSHQISEQFGSNCTPRFGNALFSGGSSKKGFCDEGKNTNLSWGGTSQHIQLIKYRLEMRRRIFLRARELRD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02426 170 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Pste5g02426 170 SUPERFAMILY beta-beta-alpha zinc fingers 19 49 IPR036236 -
Pste5g02426 170 Gene3D Classic Zinc Finger 3 66 - -
Pste5g02426 170 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Pste5g02426 170 PANTHER ZINC FINGER PROTEIN JAGGED 16 117 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02426 Pste-Chr5 16832735 16833331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02426 17 53 C2H2 Transcription Factor Family AT5G14010 72.973 1.99e-14 65.5