Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02415 ATGGCCGATAAGCAACCCCACTTGAACGGTGCCTATTACGGTCCTGCCATTCCCCCGGCGGAGCAACCACGGTACCGGCCTCAGTCTCACCGCGGAAGAAGCTGCTGCTGCTGCCTCTTTGGAATATTGTGGAAGATCTTGGTTGCACTCATAGTTATAGTTGGCCTGGTAATCCTTGTCTGCTATCTTGTGGTTCAACCCCGGTCCTTCAAGTTCTATGTAACGGAAGCCGACCTGACCCAATTTGATTACTATACCAACAACAAAACCCTCCACTACAACATGGTCCTCAACTTCACCGCACGCAACCCCAACAAGAAACTAAACATATACTACGACAAAGTAGAGGCATTAGCATTCTACGAGGGCGCCAGGTTTGCTAACTACGATGTCATCACTCACATGAACTCCTTCCGCCAGTACAAGAAGAGCAGCGACCCCATGAGCGCTGTTTTCTCCGGCCACAGAGTGTTGCCACTCGACAATCACCAACTCTCACAGTTCAACCAAGACAAGACTCTTGGGGCTTATGACATATATGTCAAGCTCTACTTCAGAATTCGTTTCAGACTCGGGGACTTCACATTCCATAATCTCGACTTCAAGCCCAAAGTCAAATGTGACATTAAGGTTCCTTTCCGCAAAAATACCACCTTTACTATGTTTCAACCCACCAAGTGCCGTGTCGATTTCTAG 696 0.4828 MADKQPHLNGAYYGPAIPPAEQPRYRPQSHRGRSCCCCLFGILWKILVALIVIVGLVILVCYLVVQPRSFKFYVTEADLTQFDYYTNNKTLHYNMVLNFTARNPNKKLNIYYDKVEALAFYEGARFANYDVITHMNSFRQYKKSSDPMSAVFSGHRVLPLDNHQLSQFNQDKTLGAYDIYVKLYFRIRFRLGDFTFHNLDFKPKVKCDIKVPFRKNTTFTMFQPTKCRVDF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02415 231 PANTHER OS05G0367900 PROTEIN 35 213 IPR044839 GO:0098542
Pste5g02415 231 Pfam Late embryogenesis abundant protein 99 207 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02415 Pste-Chr5 16744582 16745277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02415 64 213 SNARE and Associated Proteins AT1G32270 32.000 3.98e-16 74.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02415 5 16744582 16745277 Pste5g02415 5 16744582 16745277 ECH
Pste5g02415 5 16744582 16745277 Pste4g02615 4 18479109 18479804 PCT