Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02413 ATGGCTGACAAGCAACCGCACTTGAATGGCGCTTATTACGGTCCTGCCATTCCCCCGGCTGAGCCGCCACGCTACCGGCCTCAACGCCAAAGAAGCTGTTGCTGCTGCGTCTTTGGAATTTTCTGGAAGGTTATGATTGCACTCATCGTCCTGGTTGGTCTGGCAGCCCTGATCTTCTGGTTGGTGGTTCAACCCCGGTCCTTCAAGTTCTATGTCACAGAAGCCGAGCTAACTCAATTCGAGTACGACACCAATAGCAACACCCTCCACTACAACATGGTCCTCAACTTCACGGTTCGCAACCCCAACAAAAAGCTCAGCATATACTACGACAAAGTTGAGGCGTTAGCATTCTACGAGGACGCCAGGTTTTCCAATTACGATGTCATCACTCACACCAACTCCTTCCGCCAGTACAAGAAGAGCACCAACCTCATGACCGCTGTTTTCTCGGGGAACAGAGTGCTGCCCCTCGACAATGAACAAATATCTGAGTTGAACCAAGACAAGAGTGATGGGGTTTATGACATCTATGTCAAGCTCTACTTCAGGATTCGCTTCAGACTCGGGGACGTCAAATCCCGTCGCTTCAAGCCTAAGGTCGAATGTGATCTAAAGGTTCCCTTCAGTAACAATTCCACCGTTACTGTGTTTCAGGCTACCAAGTGTGATGTCGATGTCCATCATTAG 690 0.4971 MADKQPHLNGAYYGPAIPPAEPPRYRPQRQRSCCCCVFGIFWKVMIALIVLVGLAALIFWLVVQPRSFKFYVTEAELTQFEYDTNSNTLHYNMVLNFTVRNPNKKLSIYYDKVEALAFYEDARFSNYDVITHTNSFRQYKKSTNLMTAVFSGNRVLPLDNEQISELNQDKSDGVYDIYVKLYFRIRFRLGDVKSRRFKPKVECDLKVPFSNNSTVTVFQATKCDVDVHH 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02413 229 PANTHER OS05G0367900 PROTEIN 31 214 IPR044839 GO:0098542
Pste5g02413 229 Pfam Late embryogenesis abundant protein 97 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02413 Pste-Chr5 16731738 16732427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02413 62 214 SNARE and Associated Proteins AT1G32270 33.333 1.32e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02413 5 16731738 16732427 Pste4g02611 4 18448844 18468317 PCT