Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02368 ATGGTCCTCTTTTACCTTCGTCCAAACACCTCAAGTTCCACCGCAAACTCCGCAAAAATGGCAGCAACAGCAAGGGGTGATTGTAGCGTCCAACAAGGAGAGAAGGACATTCTGACAAGGCTTCCAACAACCAGCAACGAGAGAATGCCATTTTTGACAGGAGTTCTTTATAGGGACGCCGGTGATATAGCTCGAGCAATTAATGCTTATGAGCAATGTCTTCAGATTGATCTTGATTCTCGAAATGCTGGCCAGAATCGCTTGCTTGCAATGAACTACATAGAGAAAGGACATGATAACGCACTTTTTGAGGTTCACAGGGAATGGGGCAGGCGATTCATGAGACTGTATCCACAGTACACATCATGGGACAACTCAAAAGATCCTGAACGGCCCCTTTTGATAGGCTATGTGTCTCCAGATTATTTTACTCATTCTGTGTCATATTTCATAGAAGCACCCCTTGTTTATCATGACTACTCCAATTTCAAAGTGATTGTTTATTCAGCAGTTGTCAAGGCAGATGCCAAAACCGTTAGATTTAGAGAGAAAGTTTTAAGTAAAGGTGGCATCTGGAAAGACATTTATGGAATTGATGAAAAGAGGGTAGCCAACATGGTTAGAGAAGATAAAGTTGATATTTTGGTAGAACTTACAGGACATACAGCAAACAATAAATTGGGAATGATGGCATGTCGACCTGCACCTATTCAGGTGACTTGGATTGGTTATCCCAATACAACAGGATTACCTACAATTGATTATAGAATCACTGATTCACTGGCAGACCCTCCTGAAACAAAGCAGAAGCATGTTGAGGAGTTAGTTAGATTGCCAGAATGCTTCCTTTGTTACACCCCTTCCCCTGAGGCTGGTCCTGTTTGTCCAACTCCTGCTCTTTCTAATGGTTTCATCACATTTGGCAGTTTTAACAATCTTGCCAAGATTACGCCAAAGGTATTACAGGTTTGGGCAAGGATACTGCAAGCAATTCCAAATTCCCGCCTTGTGGTAAAATGTAAACCATTTTGCTGTGACAGTGTGCGACAAAGATTCCTTTCAACCCTAGAACAGTTAGGTTTAGAACCACTACGTGTTGATCTTTTGCCCCTTATTCTTCTTAACCATGATCATATGCAAGCCTATTCTCTGATGGACATCAGCTTGGATACATTTCCATATGCTGGAACAACAACAACATGTGAATCATTATACATGGGAGTTCCATGTGTCACTATGGCTGGACTAGGTCATTTAATTGCCAGAAATGAAGATGAATATGTTGAATTGGCTCAGCAGTTGGCCTCTGAGATATCCGCACTACATAATTTGAGAATTAGTCTGCGAGGTCTCATGTCCAAGTCCCCTCTATGTGATGGTGCAAAATTTATCCTAGGTCTAGAGTCAACATACAGAAATATGTGGCACAGGTATTGTAGAGGAGATGTTCCATCTTTGAAACGCATAGAATTGTTACAAGAAGTTGCTACTGGTGACCTGTCTAACAATACTTCTGAGCCAACAAGGATTGCAAGCTCAAGAGAAGACAATCCTGGATCTGTCAAAGCCAATGGATTTAATACAATGTCTGTGTCAGAGTTTAACATTCACAGTTGCGGAGAAAAAGGTGGGTCATCGAAACACAGTAGTAAACAAGGAAAGACGAGTTAAAGTTGAATTTCATCCGAGAATCCTTGCGTAGCGATTCAAGGATGATGAAACTTCATTTCAATAGTTGATTAGTTGTACTATGGGGTTGGATGGTGTATACTAGTTGCTGCTGGAAGCAACCACAGCATCACACATAGTTAACCTGCATAGTAAAATTGGGGGCGGGGGCTATAGTTAGTTTAGTTATAAAGCCCCCTTCGTTGACATTGTTTCGGTATTGCAAGAGGTGAAGCTAGCCGAGCTGCTGTCTGTAACACATAGTTTCGGTAACGGTCACCTGTTGCGTATTTCCCCCCTCGATTAAATTACAATAGTTGCGTTGCGTATAGCTTGTGTAATTTGTTTGTTCTTACTCCTTTTCTACATGTCTTTTTTTCATCTGTTCAATGTGCAATACCAAAACTTGGGGTTTTTCTCCCTCCACCTCTACTTTTTGTAAATCACATATTGCTCTTAGCTTAATATAAGTATCAAGGGGTGTGGGTGTCTGGAATTGATGTTCTGGATGTTGCTAAAACTTAAAACCAACACGAAGGTAGAACCTAAAATACCC 2224 0.4123 MVLFYLRPNTSSSTANSAKMAATARGDCSVQQGEKDILTRLPTTSNERMPFLTGVLYRDAGDIARAINAYEQCLQIDLDSRNAGQNRLLAMNYIEKGHDNALFEVHREWGRRFMRLYPQYTSWDNSKDPERPLLIGYVSPDYFTHSVSYFIEAPLVYHDYSNFKVIVYSAVVKADAKTVRFREKVLSKGGIWKDIYGIDEKRVANMVREDKVDILVELTGHTANNKLGMMACRPAPIQVTWIGYPNTTGLPTIDYRITDSLADPPETKQKHVEELVRLPECFLCYTPSPEAGPVCPTPALSNGFITFGSFNNLAKITPKVLQVWARILQAIPNSRLVVKCKPFCCDSVRQRFLSTLEQLGLEPLRVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESLYMGVPCVTMAGLGHLIARNEDEYVELAQQLASEISALHNLRISLRGLMSKSPLCDGAKFILGLESTYRNMWHRYCRGDVPSLKRIELLQEVATGDLSNNTSEPTRIASSREDNPGSVKANGFNTMSVSEFNIHSCGEKGGSSKHSSKQGKTS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02368 556 MobiDBLite consensus disorder prediction 542 556 - -
Pste5g02368 556 SUPERFAMILY TPR-like 53 418 IPR011990 GO:0005515
Pste5g02368 556 ProSiteProfiles TPR repeat profile. 47 80 IPR019734 GO:0005515
Pste5g02368 556 Gene3D - 117 293 - -
Pste5g02368 556 Pfam Glycosyl transferase family 41 300 463 IPR029489 -
Pste5g02368 556 Pfam Glycosyl transferase family 41 121 283 IPR029489 -
Pste5g02368 556 MobiDBLite consensus disorder prediction 537 556 - -
Pste5g02368 556 Gene3D Glycogen Phosphorylase B; 298 455 - -
Pste5g02368 556 PANTHER UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED 7 502 - -
Pste5g02368 556 MobiDBLite consensus disorder prediction 500 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02368 Pste-Chr5 16094177 16106752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02368 47 525 Glycosyltransferase AT3G11540 74.597 0.0 791