Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02341 ATGCTAGAAGAAGGAGAAAAGAAAGAAGTTTTACCTGAAGGGGTGACTCTTGTACAAGAGAAGAAGGAGAAGGAGAAAAATGACAAGGGGCATGAAGGAGTGGTGATTTTGTTGATGGGTGCTTGCTGGAGTAATAAGATTAAGTCTGTGAGTCCTTCCAATACAGGGATCACTTCTAGAAGTGTCAGCAGGAGTGGCAATGACATCAGCTCTAATAGCAGGAACTCATCAGCTTCCGTATCTGTCACTTCTCGGAGTGAGGGTGAGATCTTGCAATCTTCCAACTTGAAAAGCTTCAGCTATAATGAACTACGAGCGGCTACTAGAAATTTCCGCCCAGATAGTGTCTTGGGGGAGGGTGGATTTGGTTCAGTTTTTAAGGGCTGGATTGATGAGTATACACTTGCTGCTACCAAACCGGGAATAGGCATGATTGTTGCTGTGAAGAGGCTTAACTTAGATGGGTTCCAGGGTCACAGAGAGTGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAACCTTGTCAAATTAATAGGATACTGCTTTGAGGATGAGCATCGTCTTCTGGTTTATGAATTTATGCCTAAGGGTAGCATGGAAAATCATCTTTTCAGAAGAGGTTCTTACTTTCAGCCATTCTCTTGGAGTTTGCGAATGAAAATAGCACTTGGGGCTGCAAAGGGTCTTGCTTTTCTTCATAGTACAGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTCGATACACACTATAATGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGCCATGTCTCTACTAGAGTGATGGGAACCCGCGGATATGCAGCACCAGAGTATCTAGCAACAGGTCATCTCACTCCCAAGAGTGATGTATATAGTTTCGGAGTAGTTCTTCTGGAAATGATATCAGGAAGACGAGCTATAGACAAGAACCAGCCAATTGGAGAGCATAACCTTGTTGATTGGGCCAAGCCTTACCTATCTAATAAACGAAGAGTTTTCCGTGTAATGGATCCACGCTTGGAAGGTCAATATTCGCATAGTCGAGCTCAAGCAGCAGCTGCACTTGCGATGCAATGTCTTGCTATAGAGCCCAAGTGCAGGCCAAATATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATGTACGCAATTCTGGCGTTGGCCATTCCAATGGTGGCAATAATGGTGCTGATGTACCTAGAAAGGCTTCTGCTTATCCTAGGCCTTCTACTGCTCTCCTCGGCAGTTGAAAGAATTTTGTGACCTGGCAAGTAGTAAGCAGAGGTGCAGAACACAGAATGTTCAGAGGTTTAGGCGTGGCATGACATGAACCATATTTTATGTAAGCCTTGTATAGTTTGTTTTATTTCTATGTTATATTTTGTGCTATATATAATTTTTTTTATTGTTGTTGTGGTCCTGATTGTTAGACATGCAAATGCATGAGTCTAATGTGGATCCTTAAGGTGTTAATTAATTTTGAGCCCTGTAAAAACTGCAACACTGCCCATGTGGTTGATGGTCTACATTGTTATCTTTTGCTTTTAATATGTAAAAGTCTTCATCTTGTTGACTACATGACTTCCATCACCACCACCAAACCCAGTTGACTCTGCCTTTTCATTTGTTTCAAATCATCCAGGTAGCATTGTGGGTCACTTTTAGTTCAACCGTTTTTTCTTTATTCATTGAAACTTTTTTAAGTCTAATTTTCTAGCTGTCGCATTTGTTGCAACTAACATGCATCTTGAAATTTATTTTATGTTTACATGCTTGAAAATATAAAACTAATGGAAGTTCTTTAGGATGCCAAGTATCACGCCTTAATGATTCTGCAGCCTGCACGTTCTGGAGATATCTATTTATTTCTGTGTGTGCTTTGAAATGTTGAAGTTCGTTCTAACCAATTCAGATACAATGCATGAGAAGATATAACTGTAAATGATTCTCATGGCTCCGCTAATCTTTATAAGGGAATCAAGAACTTCTACTCACCTTGATCAAGACTTCTACAAATACAATGTTGATTCTTCTTTCTCATGATCAAAGCAAAGATTCTTCCTTTCTGTATTCCTGC 2174 0.4052 MLEEGEKKEVLPEGVTLVQEKKEKEKNDKGHEGVVILLMGACWSNKIKSVSPSNTGITSRSVSRSGNDISSNSRNSSASVSVTSRSEGEILQSSNLKSFSYNELRAATRNFRPDSVLGEGGFGSVFKGWIDEYTLAATKPGIGMIVAVKRLNLDGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTHYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTPKSDVYSFGVVLLEMISGRRAIDKNQPIGEHNLVDWAKPYLSNKRRVFRVMDPRLEGQYSHSRAQAAAALAMQCLAIEPKCRPNMDEVVKALEQLQESKDMQRKGADHKHHHVRNSGVGHSNGGNNGADVPRKASAYPRPSTALLGS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02341 448 MobiDBLite consensus disorder prediction 400 448 - -
Pste5g02341 448 Gene3D Transferase(Phosphotransferase) domain 1 197 421 - -
Pste5g02341 448 PANTHER OS01G0588500 PROTEIN-RELATED 73 397 - -
Pste5g02341 448 MobiDBLite consensus disorder prediction 1 28 - -
Pste5g02341 448 ProSitePatterns Protein kinases ATP-binding region signature. 117 149 IPR017441 GO:0005524
Pste5g02341 448 MobiDBLite consensus disorder prediction 50 84 - -
Pste5g02341 448 FunFam Serine/threonine-protein kinase BIK1 77 196 - -
Pste5g02341 448 SUPERFAMILY Protein kinase-like (PK-like) 87 399 IPR011009 -
Pste5g02341 448 Gene3D Phosphorylase Kinase; domain 1 86 196 - -
Pste5g02341 448 ProSiteProfiles Protein kinase domain profile. 111 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02341 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Pste5g02341 448 Pfam Protein kinase domain 114 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste5g02341 448 FunFam Probable serine/threonine-protein kinase PBL8 197 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02341 Pste-Chr5 15894173 15903432 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02341 89 401 Glycoside Hydrolase AT3G07070 50.955 2.46e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste5g02341 Pkinase 4.8e-46 CL0016