Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02327 ATGATAATGGATCCGCGTCTTCGTGGGTTTAGTGGCACCCCTAATGAAATCCGGTTGGGAAATCAGAGATTTGCAAATGGTTTCTTTGATCAGAAGAGTAGGGAATTTAGTTACCTTCAGTCCAATCTAGAACCAACTAACACTAACACACCTTCTTCATCCTCGGTTTTAACTCATGAGGAACCTTCTCCGGAGGACTGTGAATTTTCTGATGCAATTTTGACTTACATCAGTCAGATCCTTATGGAGGAAGACATGGAAGATAAGACATGTATGCTGCAAGATTCTTTGGATCTTCAAATTGCTGAGAAATCTTTCTATGAGGTAATAGGTGAAAAGTACCCTTGTTCACCTTTAGGAAATCCTGGTCCTGTTGATCCAGATGATGGGATTGGGGATCATAATCTCTTTAAAAATTATGGTACTTCTTATAATGATGGTGACCTCAGTAGCATTTTTACTAGCAATTCCTTGCGCCGAAGTTTGGGGGAACCTCCTAACCAGAATTTTCAAGGCAATAGCATTTCAATGTCATCTTATAGCTCTTCAAACAGTGTGATAAGTAGTGTGGAAAGGCCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGCGAGAGTCAATCCATTTTTCAATTTCAGAAGGGTGTTGAGGAGGCTAGCAAGTTTCTTCCAAGTGGAAATGGATTCTTAGCTAATTTGGGTGTGGCTAATGTTTCAACAGTAGAGCCTAGAGTGGGGAGTGATGAATTGTCAGTTAAGGTGGAGAAAGATGAAGTGGAGTATTTTCTTGCTGGATCCAAAGTAAGGAAGCATCATCACAGGGAAGAAGGGGATGCTGAAGAAAATAGAAGCAGCAAGCAAGCTGCAGTTTTCTCGGAACCTACATTGCCATCATCTATGTTTGATATATTCCTGCTTCATAGTTTAGGAGATGGTAAGAAGCATTTTATGGCACGTCGCGAGGCTTTACAAACTAAGATTGATAAGATAATGGTGTCAAATGGTAAATCAAAGGGTTCCAATAGTGGTAAGGGGCGTAGTAAGAAACAAAATGGGAAAAAGGAAGTGGTTGATTTAAGGACACTTTTGGTTCTTTGTGCACAGGCTGTTGCAGCAGATGACCATAGTGGTGCTCATGAGCTGCTAAAGAGGATCAGGCAGCATTCAAGCCCTTTTGGAGATGGAAATCAAAGGTTGGCTCATATCTTTGCTGATGGCCTTGAAGCGCGCTTGGCTGGTACTGGTAGCCAAATTTATAAAGGACTTGTTAATAAGAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTATATCTTGCTGCATGCCCTTTTAGGAAGATGATTAGTTTTATCTCTAATGTTACGATTAGGCAATCTTCAGCAAATTTAGGAAGGGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTAATTCAGAGACTTTCGTTAACAGTTGGAGGACCACCTAAACTTCGAATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTGTAGAAACTGGATGCCGCCTGGAAGCATATGCTGAATCATTTAATGTGCCATTTGAGTACAATGCCATTGCAAAAAAATGGGAAACAATTCAACTTGAGGAACTCAAGATTGATAGGGATGAGTACCTTGTTGTTACCTGTTTTCATCGTGGTAAAAATGTGCTGGATGAATCAGTAGTTGTGGACAGTCCAAGGAATAAATTCCTCAGTTTGATTAGGAAGATTAACCCAGATTTATTCATGCATGGCATTACTAATGGGGCCTTTAATGCGCCTTTCTTTGTTACTCGATTCAGAGAGGCACTGTTTCATTACTCTTCACTTTTTGACATGCTTGAAACCATTGTGCCTCGCGAGGACTGGGAGAGGATGCTAATTGAGAAAGAGATATTTGGTAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCCCGGATTCTAAGGGCTGGATTTTTGCAACAACCTTTTGAGCGTGAGTTAATAAAGATGGCAATAAAGAAAGTAAGGACTAGCTACCACAAGGATTTTGTAATTGATGAAGATAGCCAATGGTTGTTGCAAGGTTGGAAGGGGCGAATCATTTTTGCCCTTTCTTGTTGGAAACCTGCATGA 2211 0.4125 MIMDPRLRGFSGTPNEIRLGNQRFANGFFDQKSREFSYLQSNLEPTNTNTPSSSSVLTHEEPSPEDCEFSDAILTYISQILMEEDMEDKTCMLQDSLDLQIAEKSFYEVIGEKYPCSPLGNPGPVDPDDGIGDHNLFKNYGTSYNDGDLSSIFTSNSLRRSLGEPPNQNFQGNSISMSSYSSSNSVISSVERPVDSPSSILQVPDLNSESQSIFQFQKGVEEASKFLPSGNGFLANLGVANVSTVEPRVGSDELSVKVEKDEVEYFLAGSKVRKHHHREEGDAEENRSSKQAAVFSEPTLPSSMFDIFLLHSLGDGKKHFMARREALQTKIDKIMVSNGKSKGSNSGKGRSKKQNGKKEVVDLRTLLVLCAQAVAADDHSGAHELLKRIRQHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVNKRTSAADFLKAYHLYLAACPFRKMISFISNVTIRQSSANLGRVHVIDFGILYGFQWPTLIQRLSLTVGGPPKLRITGIDFPQPGFRPAERIVETGCRLEAYAESFNVPFEYNAIAKKWETIQLEELKIDRDEYLVVTCFHRGKNVLDESVVVDSPRNKFLSLIRKINPDLFMHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFLQQPFERELIKMAIKKVRTSYHKDFVIDEDSQWLLQGWKGRIIFALSCWKPA 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02327 736 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 290 724 IPR005202 -
Pste5g02327 736 ProSiteProfiles GRAS family profile. 354 734 IPR005202 -
Pste5g02327 736 MobiDBLite consensus disorder prediction 272 287 - -
Pste5g02327 736 MobiDBLite consensus disorder prediction 272 292 - -
Pste5g02327 736 MobiDBLite consensus disorder prediction 43 66 - -
Pste5g02327 736 MobiDBLite consensus disorder prediction 336 350 - -
Pste5g02327 736 Pfam GRAS domain family 363 734 IPR005202 -
Pste5g02327 736 MobiDBLite consensus disorder prediction 43 60 - -
Pste5g02327 736 MobiDBLite consensus disorder prediction 336 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02327 Pste-Chr5 15775270 15777480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02327 65 735 GRAS Transcription Factor Family AT2G37650 53.451 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste5g02327 GRAS 8.7e-110 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02327 5 15775270 15777480 Pste5g02327 5 15775270 15777480 ECH