Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02315 ATGTCAAAGACAATGATGGAGGAAGTAATGGCCACTTGGTCAGAGGGGTCAGAGGATGATGACCTTGTGAGAGAGCTTTTAGATGATGTGTCTCCTCTTCTTATGATTCCAGAGGAGGCTATTGAACCCCTTCACTCAAAAGCCTCTTCTAGTGACCAAGCCTTTAATAGGTTCATCTCCAATATTTACTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTCAGTTACCAACCAAAGAGACCATTTCCCCCAACTCTCATCAGCCAGAGTTTCCATATTGGAAAGGGGTTTGAGTAAGATTGAGAATAAGTATACCCTGAAGATCAAATGCTTTGGCAATGGGATGGGTGATGATGGATACAAGTGGAGGAAGTATGGACAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGCAGTGCCAAGAAGCAGGTTGAGAGATCCAATGAGGACCCAGACACTCTTATCATAACCTATGAAGGACTCCACTTGCACTTTGCTTACCCATATTTCCTCATGGGCCAACCACTGCAATCCCATTCCCACCCACCAATCAAGAAGTCCAAGCCCACCTCTTCACATGCCCAAACCCAAGCCCAAGCCCATGCCCATAGAGAAGATTATGTCCAGCATACACAAGAAGCCCAAGCAAATCCTGATTTGGGTGTGATGTCACCCACTTCACCAGACTCTCCACAAGGCATGGCCCAAGAAAATTTGGGCTCACAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTCGGAACCCCTCAAACAGTGTCAATAGTGCTCACACAAAATTTTCTTGTTCTTCATATCGTTCTCCTCCAACATCACCTCTCTGGGCTTCGAATTACTCCACCTCCTGCTATACCGTTGGCTTAAATTCTAGCACTTAATTTTATAATTATCTATA 947 0.4456 MSKTMMEEVMATWSEGSEDDDLVRELLDDVSPLLMIPEEAIEPLHSKASSSDQAFNRFISNIYSGPTISDIENALSVTNQRDHFPQLSSARVSILERGLSKIENKYTLKIKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPYFLMGQPLQSHSHPPIKKSKPTSSHAQTQAQAHAHREDYVQHTQEAQANPDLGVMSPTSPDSPQGMAQENLGSQGLLEDMVPFMVRNPSNSVNSAHTKFSCSSYRSPPTSPLWASNYSTSCYTVGLNSST 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02315 309 MobiDBLite consensus disorder prediction 222 248 - -
Pste5g02315 309 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02315 309 SUPERFAMILY WRKY DNA-binding domain 116 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g02315 309 Pfam WRKY DNA -binding domain 119 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02315 309 Gene3D WRKY domain 114 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste5g02315 309 MobiDBLite consensus disorder prediction 191 209 - -
Pste5g02315 309 FunFam WRKY transcription factor 105 179 - -
Pste5g02315 309 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste5g02315 309 MobiDBLite consensus disorder prediction 188 248 - -
Pste5g02315 309 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 90 210 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02315 Pste-Chr5 15660762 15663266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02315 6 266 WRKY Transcription Factor Family AT5G43290 41.549 1.01e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste5g02315 WRKY 6e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02315 5 15660762 15663266 Pste5g02315 5 15660762 15663266 ECH